Esox lucius (northern pike): 105024871
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Entry
105024871 CDS
T04894
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
els
Esox lucius (northern pike)
Pathway
els04514
Cell adhesion molecule (CAM) interaction
els04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105024871
04517 IgSF CAM signaling
105024871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105024871
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
els00537
]
105024871
Cell adhesion molecules [BR:
els04515
]
Immunoglobulin superfamily
Contactins
105024871
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
els00537
]
Others
105024871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_5
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
V-set_CD47
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
105024871
NCBI-ProteinID:
XP_012994152
UniProt:
A0AAY5L502
LinkDB
All DBs
Position
LG18:complement(3325197..3341447)
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AA seq
1040 aa
AA seq
DB search
MDTAVLVLLLLSSSISHTVAILFGEPKIFGDDATGYGPVFEEEPLDIVYTKESPDKRISM
NCRARGNPAPTYRWRRDNWEIKLLELPTDHYSLVGGNLIINNPDEKKHAGTYVCVAKNIY
GTVISKEAKVKFGFLEEFPDEERDPVTVKQGQGAVLICDPPKRWPYEVTFQWIFNEFPRF
LHPDKRRFVSQSTGNLYISKVEESDAGNYSCYVFNPQIGKGVYSKFISLIPIEELPERKY
KSDLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAEVSMGGALLHLYN
VQYEDASGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPT
PYIRWLKDGFSYGKGELKFSSLTFDDSGMYQCIAENYWGIIYASAELRVIACAPTFEFNP
VKKYLLGANNGRVVIECKPRAAPRPKFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GLYTCFAENDKGKANSSGILTITEATQITLAPEDTVAMVGDEVRLQCQASYDPSLDVTFI
WSLDFRVIDLYLEWKHYQRVMDQENSGELKIMNVQIAHEGRYTCTAQTVVDNVTASADLK
VKGRPGPPGGVRVEEIRDTSVKLVWNRGADHGSPVLGYTIQTRDFYALTKDDWRVASTSP
TALNGMAVMADVVDLYPWMQYEFRVYATNEFGDGEASVPSIKIKTWDAVPVVAPTNVGGY
GGKDGELVVTWTPVKPQFFYGKKFGYVVAFKPHDGSDWWYETISDPETRRYVHRDSSFGV
TSDDFQVREFQVKVKTFNIKGDGPYSLTTTVYYPRDVPSESPTDVYARPVSSHEALVWWL
PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVPATANQTRLENMRPDSHYLIEVRA
YNGAGVGPPSEHCEMFTKRAPPSVAPRMWRYISWTGKWLYVWWDHIPYNWFGNESFPLYY
KVMFRKTGYITGPIYMTGWHFMDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR
PTLNLAAVLLLALCIMGLET
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggataccgctgtcctggtcctgcttctgttgtcatcctcaatatcccacactgtggca
attttgtttggtgagcccaaaatcttcggagatgacgctactggctacggtccagtcttt
gaagaggagcctctggacatcgtgtacaccaaagagtcccctgacaaacgcatctctatg
aactgtagagcgcggggcaaccctgctccaacgtataggtggaggcgtgacaactgggag
atcaagctgctggagctgcctactgaccactacagcctggtgggcgggaacctcatcatc
aacaacccggacgagaagaaacacgccgggacgtacgtctgcgtcgccaaaaacatctac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggattcttggaggagttcccagat
gaagaaagggacccagttactgtgaaacagggccagggggctgtgctgatctgtgaccct
ccgaagcgttggccatatgaggtaaccttccagtggatcttcaacgagtttccgcgcttc
cttcacccagataagcgccgcttcgtctctcagagcactgggaatctgtacatctccaag
gtggaggagtctgatgcggggaactactcctgctatgtgttcaacccacagatcggcaag
ggggtctactccaagttcatctccctgatccccatagaggagttaccagagaggaagtac
aagtcggatcttgtggtgaagttccccgacaccacagccatgctcaactacaatgtcacg
ctggagtgcttcgctctgggcaaccccgcccctcacatcgtgtggcggaagattggtgcc
accgaccttcctgctagcgcggaggtcagcatgggtggggccctgctccacctctacaac
gtccagtacgaggacgcttcgggctacgagtgtgaggccatcaaccagaagtggcaggac
tggcatcaggcgtggctgtatgtagaggctgctcctgagtgggctgtgaccatcaacaat
acccagaaggatgttggttctgaacataccatgtcctgtgtggccaatgggaaacccacc
ccctacatccgatggctcaaggacggcttctcgtatggcaaaggtgagctgaagttctcc
agtctgacgttcgacgactccgggatgtaccagtgtatcgctgagaactactggggcatc
atctacgccagcgccgagctacgtgtcattgcttgtgccccgacgtttgagttcaacccg
gtgaagaagtaccttctgggagctaacaacggccgtgtggttatagagtgcaagccccga
gccgcgcccaggcccaaattcacctggaccaaaggaaaggaggtgctcttcaacaactca
cgcatatccataatgtttgatgggagtttggagatcctgaatgctacgaggaatgatgag
gggctctacacctgcttcgctgagaatgacaaaggcaaggccaacagctcagggattctc
accatcacagaggcaacccagatcactttggcccctgaggacacagtagcgatggttgga
gacgaggtgcgtctgcagtgtcaggcgtcctacgaccccagcctggacgtgaccttcatc
tggtccctggacttcagggtcatcgacctctacctggagtggaagcattaccagcgcgtc
atggaccaggagaatagcggagagctgaaaatcatgaacgtccagattgcacatgaggga
cgctacacctgcacagcccagactgtcgtggacaatgtcaccgcgtcagcagacctcaag
gtcaaaggccgccccggtcctccaggtggggtgagggtggaggagatcagggacacatcc
gtgaaactggtgtggaaccgaggggcggaccacggcagccccgtcctcggctacaccatc
cagaccagggatttctacgccctgactaaggacgactggagagtggcctccacctccccc
acggcgctgaatggcatggcagtgatggccgacgtggtggacctgtacccctggatgcag
tatgagttccgggtctatgccactaacgagtttggagacggggaggccagcgtcccctcg
atcaagatcaaaacctgggacgcagtgcctgtggtggccccaaccaacgtgggaggatac
gggggcaaggacggggaacttgtcgtgacatggacgccagtgaagccgcagttcttctac
ggtaagaagtttggctacgttgtggccttcaagcctcacgacgggtccgactggtggtac
gagaccatctccgaccctgagacgcgacgctacgtacacagagattcctcttttggggtc
acgtcggacgacttccaggtcagggagttccaggtcaaagtaaagacgtttaacatcaaa
ggagacgggccctacagcctgaccaccaccgtctactaccctcgagatgtcccctcagag
tctcctacagacgtttatgcccggccagtgtcatcccatgaggccctggtttggtggctg
ccggtgatggacaccggtactggccttcagcagtacatagatggataccaggttaaatac
tggaggaagtacgatgacacagaaccgggggccaatcggatttttgtgccggccacggcg
aaccagaccaggcttgagaacatgcgtccagactcccactacctgatagaggtcagagcg
tataacggggctggcgttggcccacccagcgaacactgcgagatgttcaccaagagagcc
cctcccagtgtggcacctcggatgtggcgttatatcagctggacgggcaagtggctctat
gtctggtgggatcacatcccctacaactggtttggcaacgagtctttcccattatactac
aaggtgatgttcaggaagactggctacatcacagggccaatctacatgacagggtggcac
ttcatggacttcccaatgccccaggtgggggactatgagctggaggtcagaggtcgctat
gagggaggagacggccccatcaggaagatccgacttcagggtaaggcgtctttcctgagg
ccgactctcaacttggccgccgtcctgctcctggccctttgcattatgggattggagaca
taa
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