Esox lucius (northern pike): 105027294
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Entry
105027294 CDS
T04894
Symbol
itgav
Name
(RefSeq) integrin alpha-V isoform X1
KO
K06487
integrin alpha V
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04148
Efferocytosis
els04510
Focal adhesion
els04512
ECM-receptor interaction
els04514
Cell adhesion molecules
els04810
Regulation of actin cytoskeleton
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105027294 (itgav)
04514 Cell adhesion molecules
105027294 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105027294 (itgav)
04148 Efferocytosis
105027294 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
105027294 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105027294 (itgav)
04810 Regulation of actin cytoskeleton
105027294 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105027294 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105027294 (itgav)
04515 Cell adhesion molecules [BR:
els04515
]
105027294 (itgav)
04090 CD molecules [BR:
els04090
]
105027294 (itgav)
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105027294 (itgav)
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105027294 (itgav)
Exosomal proteins of epithelial cells
105027294 (itgav)
Cell adhesion molecules [BR:
els04515
]
Integrins
Integrin alpha subunits
105027294 (itgav)
CD molecules [BR:
els04090
]
Proteins
105027294 (itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
105027294
NCBI-ProteinID:
XP_012986587
UniProt:
A0A3P9A117
LinkDB
All DBs
Position
LG20:complement(5875809..5917199)
Genome browser
AA seq
1040 aa
AA seq
DB search
MERRRKLYVSLALILPCLQWTTSFNLDIENPNVFSGPKGSYFGFSVDFFMPDNKQSNILI
GAPRANTSSASSVVERGAVYTCPWQQTDGCTQVLFDNTGDRTNDAGVQMEFKSNQWFGAS
VRSQGENILACAPLYQWSTYSYNEREPVGTCFFKKGEKVVEYSPCRSRAYSPEGQGFCQA
GFSIDFVKQNNRVVVGGPGSFYWQGQLISDDILEIINRVNNDFITPYNNQLTTRSAAALY
DDSYLGYSVTVGDFNNDGSDDYITGVPRGEKALGYVNIFNGKNMQSVLNLTGTQMAAYFG
HSVAATDINKDGLIDLFVGAPLFMDLGGAQKQREVGQVSVFLGDGGFSFQPPLTLNGTEI
YSRFGSSIAALGDLDMDGFNDVAIAAPYGGPKHQGLVYIHNGRATGPSLTPSQVLEGRWA
SSNMPPSFGYSLHGATDIDHNGYPDLIVGVFGVDKAVLYRARPVISVNATLDISPQILNP
EDKSCKLPDSTPVSCFKVKYCLKARGKGAPASLKFQVDLVLDRLRPKGPNKRVLFLHSKT
FQYSKNMTVSNGLGPTCEEQEAYLIEEFRDKITPIVVLMEYKPDYQQAADKTGLLPILDL
SVPTNISKQAHILLDCGEDNICKPDLRLSVVSDQKEMYIGDDNTLTMGVTVENLGEAAYE
AELRVFLPPQADFSEVVSNSETTSKLSCAPERENQTTVVVCYLGNPMKGGTKVLAGLRFS
VHKLSEQDTQVRFDLQIQSSNQFNNTSSLVSSITKLAVLAKVDIRGVSTPDQVFLPIANW
QMKESPVVGDDIGPAIRHIYELRNHGPSTFSKALLDIEWPYQFNNGSLLYITKLEVDGMN
CTTEMEINPLNVSISLSSEKNTTGNGEVDNTAGRGRNRRDLKKKEIEGDLETLDCSKAQC
MKIRCLVGRVERGQSAILYIHSRLGVATFLKTESQNRSYTVRSSASFSVTEMPYNKNLVS
DLPANTTTVSMAVIWVKSEPEPVPAWVVALAVLAGLLLLALLIFIMYKLGFFKRVRPPQD
DSTEKEQLAPQESGDRNTDA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacgtcgcaaactgtatgtgtctttagctttgattttgccttgtttacaatgg
acaacttctttcaacctggacatcgagaaccccaatgtattctccggaccaaaaggaagt
tattttggattttcggtggatttcttcatgccagataacaagcagtcaaacattcttata
ggagcacccagggccaacacctcgtcggcttcctccgtggtggagagaggagctgtctat
acctgcccttggcagcagacggacggctgcactcaagtactgtttgacaacactggtgat
cggacgaatgatgccggtgtacagatggagttcaagtccaaccagtggtttggggcgagt
gtacgctcacaaggggagaacatcctggcctgtgcacccctctatcagtggagtacatat
agttacaacgagagggaacctgtgggaacatgcttcttcaaaaaaggagagaaagttgtg
gaatactccccttgtcgatcaagggcttactctcccgaaggacagggcttctgtcaagct
gggttcagtattgactttgtcaagcagaacaacagggtggttgttggaggccctggtagt
ttctattggcaaggtcaactgatatctgatgatatcttggagatcataaaccgcgtaaac
aatgacttcatcactccctacaataaccagctgacaaccaggtcggcagccgctctgtac
gatgacagctacttaggatactctgtgactgttggtgatttcaacaatgatggatctgat
gattacattactggggtacccaggggagagaaagctcttggctatgtgaacatctttaac
gggaagaacatgcagtcagtgctgaacctcaccggaactcagatggctgcctacttcggt
cattccgtagcagcgactgacatcaataaagacgggctgattgacctgttcgtgggagct
cctctgttcatggaccttggaggcgctcagaaacagagggaggtgggccaggtgtccgtg
ttcctgggggatggagggttctccttccagcctccgctgacactgaatgggactgagatc
tactcccgcttcggcagctccatcgccgccctcggagacttggacatggacggattcaac
gacgtggccatcgctgccccctatggtgggccgaaacaccagggcctggtgtacattcac
aacgggagggcgacggggcccagcctgacgccatctcaggtccttgaggggaggtgggcc
tccagcaacatgccccccagctttggatactccctgcacggagccaccgacatagaccac
aatggatacccagacctaatagttggggtgtttggtgtagacaaagccgttctctacagg
gcacggccggtcatcagcgtgaacgccaccctggacatcagccctcagattctcaaccca
gaagataagagctgcaaactacctgacagcaccccggtgtcctgtttcaaagtcaagtac
tgtctcaaggcccgtgggaagggcgcaccagcctcgttgaagttccaggtggacctggtt
ctggacagactccgacccaaagggccgaacaagagggtgctgttcctccacagcaagaca
ttccagtactctaagaacatgaccgtcagcaatggtctaggacccacttgtgaggagcag
gaggcttatctcatagaagagttccgtgacaaaatcactcccattgtggtgctgatggag
tacaaaccggactaccagcaggccgccgacaagacgggactactgcccattctggacctg
tcagtccccacaaacatctccaaacaggctcacatccttctggactgcggagaggacaac
atctgcaaacccgacctgaggctgtccgtggtgagtgaccagaaggagatgtacatcgga
gatgacaacacgctgaccatgggggtaacggtggagaatttgggagaggcggcatatgag
gcagagctacgtgtcttcttgcccccacaggctgacttcagcgaagtggtcagcaacagt
gagaccacctctaagctgtcctgtgcccctgagagagagaaccagaccacggtggtggtg
tgttacctaggcaaccccatgaaaggaggaaccaaggtcctggctggcctgcgcttcagc
gttcacaagctgtcggagcaggacacgcaggtcaggtttgacctgcagatacagagttcc
aaccagttcaacaacaccagcagccttgtctccagcatcacaaagctggctgttctggcc
aaggtggatatcagaggggtttccacaccagaccaggtcttcttgcccattgcaaactgg
cagatgaaggaatccccagtggtaggggacgacatcggcccagcgatccgacacatctac
gagcttcgtaaccatggtccaagtaccttcagcaaggccttgctggacattgagtggccc
taccagttcaacaatggatctctactctacataactaaactagaggtggacgggatgaac
tgcaccactgaaatggagattaaccccctcaacgtctcgatctctctgtcttcggagaag
aacactacagggaatggtgaagtggacaacactgcaggaaggggcaggaaccgcagagac
ctgaagaagaaggagatagagggagacctggaaaccctggactgctccaaggcccagtgt
atgaagatccgctgcctggtgggtcgtgtggagagaggtcaaagtgccatcctctacatc
cattccagactgggagtggccaccttcctcaagactgagagtcagaaccgttcgtacacg
gtgagatcttctgcttccttcagtgtaacagagatgccgtataataaaaacctggtctct
gatctccccgccaatacgaccacggtgagtatggcagtgatctgggtgaagtctgagcca
gaaccagtcccggcgtgggttgtggccctggcggtgctggccggcctgcttctgctggct
ctgctcatcttcatcatgtacaagctgggtttcttcaagcgtgtgcgcccccctcaggac
gacagcacagagaaagaacagctggcgccgcaggagagcggtgacagaaacacagatgcc
tga
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