KEGG   Esox lucius (northern pike): 105028092
Entry
105028092         CDS       T04894                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
els  Esox lucius (northern pike)
Pathway
els03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105028092 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:els03041]
    105028092 (sf3b6)
Spliceosome [BR:els03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105028092 (sf3b6)
 Complex B
    105028092 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    105028092 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 105028092
NCBI-ProteinID: NP_001291169
UniProt: C1BZB1
LinkDB
Position
LG18:19000233..19002743
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPESRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggctatgcaagcagctaaacgagctaatattcgattaccaccagaagtcaacagaata
ctctacattagaaacctaccatacaagatcacagctgaagaaatgtacgacatctttggg
aaatatggaccaatacggcagattcgaactggaaacacacctgaatcaagagggaccgct
tacgtggtctacgaggacatctttgatgccaagaacgcttgtgatcacctgtctggattc
aatgtctgcaacagatatcttgttgttttgtactacaatgccaacagggctttccagaag
atggacacaaagaagaaagaggagcagctgaaacttctgaaggagaaatatggtatcaac
acagaccccccgaaatag

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