Esox lucius (northern pike): 105030898
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Entry
105030898 CDS
T04894
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105030898
04020 Calcium signaling pathway
105030898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105030898
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105030898
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
ECSCR
Motif
Other DBs
NCBI-GeneID:
105030898
NCBI-ProteinID:
XP_028978184
LinkDB
All DBs
Position
LG09:complement(9182626..9256381)
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AA seq
1698 aa
AA seq
DB search
MVILLNCVTLGMYQPCECKNCSTDRCQLLETFDGFIFVFFAVEMVVKMLALGIFGRRCYL
GDTWNRLDFLIVMAGMLEYSMDQQDINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLICFFVFFIFGIIGVQLWAGKLRNRCYPEENFTLTSGITLPHTYYMVDTEDER
PFVCSLSQDGGNLKCANIPARRQGNNTCCLNKDNVTQLSGLSNGSGLCVNWNQYYTRCLT
GDKNPHKDAISFDNIARAWIVIFQVITLEGWVEIMYYVMNAHCFYNFIYFILLIIIGSFF
MINLCLVVVASQFSETKQREHQLMEEQRAQANSCSTLDGLTEPSASCYESVFQLVLHVLR
KACRISKALFNRLLGRTKEVPGPVRRGERANMNGGGKGEGGERRGPHPQAVPCPHHSKPG
HAPSGDPLTLPVSHNTSGCPGCVGALSGSDGAGPEGGLAVEVATHEAGGEDSQHGAGMDD
GNDDAAAKDSGGCRRGCGKLWHEMRSKLCGIANSKYFNRGILIAILINSISMGIEHHNQP
DELTNILEICNIVFTSMFALEMILKITAFGCLMYLKFPYNVLDGIIVIISVWEIVVQRDG
GLSVLRTFRLLRVAKLIRFMPALRRQLVVLMKTVDSVATFCMLLMLFIFTFSILGMHIFG
CKFTQRTETGDTVTDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAATTPAVALYFVAL
MTFGNYVLFNLLVAILVEGYQAEGDANRSFSDEDSSHSNVDGSEKLDDCLKLSEEKTAPD
HLELTQLTPMITPSGSFSLGSRKSSMMSLGQEQRRSFSLRHGRSSVYHNWGRPPLQGAWS
RRSSWNSVGHPSQRLGRVDGAVLGGSLRARRPRPHSPYLDECESLLTRRGKASLLLSPDY
PSRRALSLELPDTLQVPGGDPASPEPRKRSVSGGGSGVVGAKRHDCNGKMPVPVSQEALS
LAEVFPQLNIAKDRPDLDEDTVCFRIRTVLEVYRPACCERRKDWSIYLFSPRNEFRLLCQ
SIITHKLFDYVILVFIFLNCITVAVERPNIVQDSWERLVLSISNYAFTAIFVAEMTIKVV
SQGLYLGETAYLRSSWNILDGFLVFISLIDIMVSMVAEAKILGVLRVLRLLRTLRPLRVI
SRFPGLRLVVETLITSLKPIGNIVLICCAFFLIFGILGVQFFKGKFYHCVGKNVKNITSK
SDCIQANYQWNNQKYNFDNLGKALMSLFVVASKDGWVDIMYQGLDAVGIDKQPIINHRPS
MLLYFISFLLIVSFFVLNMFVGVVVENFQKCRQNQEAEEAKRMEEKRQRRLEKKRRKAQK
IPYYVSYSNGRRLIHSLCTSHHLDLFITFIICVNVITMSAEHYKPPQSLVTALKYCNYFF
TATFVVEALLKLIAFGFQRFFKDRWNLLDLFIVVFSVVGIVLEEMHHNNFLPINPTIIRI
MRVLRIARVLKLLKIAEGMRALLHTVVQALPQVGNLGLLFVLLFFIYAALGVELFGKMVF
NAEHQCEGMGPHASFKHFGMALLTLFQVSTGDNWNSIMKDTLNDCPSGLSDYHCQPGFQF
IYTIYFVSFVLTAQFVLMNVVVAVLMKHLDDSNKVALENAEMDAEIELELARGQLQLASC
CMGRLAMGVVVAGIGPSSGDGGEDGRARGGQEGVTGAPEDYREDAPSSGGGHEEHRRHHK
GSLHSPALVCAQVPSFPI
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggtgatactgctgaactgtgtgaccctgggcatgtaccagccctgtgagtgtaaaaac
tgctctacggaccgctgtcagctactggagaccttcgatgggttcatctttgtcttcttt
gcggtggagatggtggtgaagatgttggctctcggaatcttcggccgccgctgttacctt
ggcgacacgtggaaccgtctggatttcctaatcgtcatggcagggatgttggagtactcg
atggaccaacaggacatcaacctcacggccattaggacagtccgagtcctgagacccctc
aaagccatcaacagagtacccagtatgcgtatcctggtcaatcttctcctggacaccctg
cccatgctgggaaatgtcttgctcatttgcttcttcgtcttcttcatcttcggcattatt
ggagtacagctgtgggcggggaagctgaggaaccgctgctaccctgaggagaatttcacc
cttacttcaggcatcaccctgcctcacacctactacatggttgacactgaagatgagcgg
cccttcgtctgctccctctcccaagatggaggtaacttgaagtgcgccaacatccctgcc
cgtcggcaaggaaacaacacctgctgcctgaacaaggacaacgtgacacaactgagcggg
ttgtcaaatgggtccggactttgcgtcaactggaaccagtactacacgcgctgtctcacc
ggggacaagaacccacacaaagacgccatcagctttgataacatcgccagggcttggatt
gtcatcttccaggtgataactctggagggttgggtggagatcatgtactacgtgatgaat
gctcactgcttttataacttcatctactttatactgctcatcattattggctccttcttc
atgatcaacctgtgcctggtggtggtggcctcccagttcagtgagaccaagcagcgagag
caccagctgatggaggagcagagggcccaagcaaactcctgctccaccctggatggcctg
accgagccctcggccagctgctacgagtctgttttccaactggtcctccacgtcctccgc
aaagcctgcaggatctccaaggccctttttaaccgcctgttggggaggaccaaggaggtg
ccaggaccggtgagaagaggggagagggctaacatgaatggaggcggaaaaggagaagga
ggagagaggagagggccacacccgcaggcggtcccctgtcctcaccactccaagccaggc
cacgccccctctggcgaccccttgaccctccctgtctcccacaacaccagtggctgccct
ggttgcgtcggggctctgtcaggcagcgacggggcgggacccgagggcggcctcgcggtg
gaggtggctactcacgaggcaggaggagaggacagccaacacggtgccgggatggacgac
gggaatgacgatgccgcagctaaggactctgggggatgtaggcgaggctgtggaaagttg
tggcacgagatgaggtccaagctgtgtgggatcgcgaatagcaagtacttcaatagggga
attctgatcgccatcctcatcaacagcatcagtatgggaattgaacatcacaatcagcca
gatgaactgaccaacatcctagaaatctgtaacatagttttcaccagcatgtttgcgttg
gagatgattctgaagataacggcattcgggtgcctgatgtacctgaagttcccgtacaac
gtgcttgacggcatcatcgtcatcatcagtgtttgggagatcgtggtccagcgcgacggg
ggcctgtccgtgttgcggaccttccggctgctgcgtgtggccaagctgatccgcttcatg
ccggccctgaggagacagctggtggtgctgatgaagactgtggacagcgtggccaccttc
tgtatgctgctgatgctcttcatcttcacattcagtatcctggggatgcatatatttggc
tgtaagttcacccagaggaccgagacaggagacacagtcacagaccggaagaactttgac
tctctactctgggccatcgtcactgtgtttcagatcctgacccaggaggactggaacgtg
gttctgtataacggcatggctgccacgacccccgcggtcgcgctctacttcgtggctctc
atgactttcggtaactacgtcctcttcaacctgctggtggccatcttggtggagggctat
caggctgagggagatgcaaatcgctccttctcggatgaagacagctcccactctaatgtt
gacgggagtgagaagcttgatgattgtctgaagttgtctgaggagaagaccgctcccgac
cacctggagttgacccagctgacccctatgataacccccagtgggtcgttttccctgggg
tcacgcaagagcagcatgatgagtctgggccaggagcagaggagatccttttctctgcgc
cacggccgcagttccgtgtaccacaattgggggcgccctccacttcagggtgcttggagt
cgcaggtccagctggaacagtgtgggtcatccctcccagcgtctgggccgtgtggacggg
gcggtactgggaggaagcctccgcgcccggagaccccgcccccactccccttaccttgat
gagtgcgagtccctcttaacccgtcgtggaaaagcctcccttctcctctccccggactac
ccctcccgccgtgctctctccctggagctccccgacactctccaggtccccgggggagat
ccggctagccccgagcccaggaagaggagcgtttccggtggggggagcggcgttgtggga
gcaaagcgtcatgactgtaacgggaagatgcccgttcctgtttcccaggaggccctgtcc
ctggcagaggtcttcccccagctcaacatcgccaaggacagaccagacctcgatgaagat
actgtgtgtttccgtatccgtacggtgttggaggtttaccggcctgcctgctgtgagagg
aggaaggactggagtatctacctcttctcaccacggaatgagttcagactgttgtgccag
tcaatcattacccacaagctttttgactacgtcatattagtcttcatctttctcaactgc
atcaccgtggcggtggagagaccaaatatagtgcaagacagctgggaacgacttgtcctc
agcatctccaattatgccttcacagccatttttgtagccgagatgactatcaaggtggtc
tctcagggtctgtacctgggtgagacggcctatctgaggagcagctggaatattctggat
ggtttcctggtcttcatctcattgattgacatcatggtatccatggtagccgaggctaag
atcctgggggtgctgagggtgctcagactgctcaggacactacgccccctcagggtgata
agtagatttccagggctgaggttggtggtagagactctcattacttctttgaagcccata
ggaaatatcgtcctcatctgctgtgccttctttctcatctttggcattcttggcgtgcag
tttttcaaggggaagttctaccactgtgtgggcaagaatgtgaagaacatcaccagcaag
tccgactgtatccaggccaattaccagtggaacaatcaaaaatacaactttgacaatctg
ggaaaggctctgatgtctctgtttgtggtggcgtccaaggatggttgggtggacatcatg
taccagggcctggatgcagtggggatagacaagcagccgatcatcaaccacagaccgtcc
atgctgctctacttcatctccttcctcctcatcgtcagtttcttcgtcctcaacatgttt
gtcggcgtggtggtcgagaactttcagaaatgcagacagaaccaggaggcagaggaggcc
aagaggatggaggagaaacgacagagacgcttggagaagaagaggaggaaggctcagaag
atcccctactacgtcagctacagcaacggccgtcggttgatccacagcctgtgcacgagc
caccacctggacctcttcatcaccttcatcatctgcgtcaacgtcatcaccatgtccgca
gagcactacaaaccaccccagtctctggtgacggctctgaagtactgtaattatttcttc
acggccacctttgtggttgaagctcttctgaagctcatcgccttcggcttccaacgcttc
ttcaaggacaggtggaatctgctggacctgttcatagtggtgttttcggtggtgggcatc
gtcctggaggagatgcaccacaacaactttctacccatcaaccccactataatccgaatc
atgagagtactgcgcatagcaagagtgctgaagctgttgaagatagctgaggggatgagg
gctcttctgcatacggtggtacaggcactgcctcaggtgggaaacctgggcctgctgttt
gtgttgctgttcttcatctacgctgccctgggggtggagttgttcggaaagatggtcttt
aacgctgagcaccagtgtgagggcatgggtccacacgcttcgtttaagcactttggcatg
gcattactgaccctctttcaggtctccaccggagacaactggaacagcattatgaaggac
accctgaacgactgcccttcgggcctcagtgattaccattgccagcccggcttccagttc
atctacaccatctactttgtctcctttgtcctcaccgctcagtttgtgctcatgaacgta
gtggtggctgtgctcatgaagcacttggatgactccaacaaggtggccctggagaatgct
gagatggatgcggagattgagttggagctggcccggggacaactccaactggcaagctgc
tgcatgggacgcctggccatgggggtggtcgtggccggaatcggaccgtcctccggagat
gggggggaagatggaagggccaggggtggccaggagggggtgaccggagccccagaagat
tacagagaagacgctccatccagtggaggtggacatgaagaacacaggcgacatcacaaa
gggagtctccactctcctgccctggtatgtgcacaggtaccgtcatttcccatataa
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integrated database retrieval system
