Candidatus Walczuchella monophlebidarum: FNIIJ_065
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Entry
FNIIJ_065 CDS
T03207
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
elv
Candidatus Walczuchella monophlebidarum
Pathway
elv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
elv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNIIJ_065 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elv03021
]
FNIIJ_065 (rpoA)
03400 DNA repair and recombination proteins [BR:
elv03400
]
FNIIJ_065 (rpoA)
Enzymes [BR:
elv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNIIJ_065 (rpoA)
Transcription machinery [BR:
elv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNIIJ_065 (rpoA)
DNA repair and recombination proteins [BR:
elv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNIIJ_065 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF5547
Motif
Other DBs
NCBI-ProteinID:
AID37369
UniProt:
A0A068DSL0
LinkDB
All DBs
Position
54603..55562
Genome browser
AA seq
319 aa
AA seq
DB search
MTIVNIIQPERVLIKSETLYSGIFEINPLEPGFGVTIGNSLRRILLSSLEGFAITSVKIE
GVNHEFSTIKGVIEDVTDIILNCKKIRFKKSSDLKSTKEEVTVCITDKEKITAGDFGQFI
SGFQVLNPDLIICNKNKSIPFNIFFIIEKGRGYVPAEANKKYESTIGTIAIDSIFTPIKN
VKYTVENCRFEPKTDYEKLSIEIQTDGSISPKEALIEASKILINHFMLFNENNISTESPN
LTELSEYTVYFEKLLNSNLSELGLSVRAQNCLKSAEIFTLRQLISKTETDLKKLKHFGIK
TLNEINIFLEKKGLGRVKK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgtaaatattatacaacctgaaagagttctcataaagagtgaaactttgtat
tcaggcattttcgaaattaaccctttggaacctggttttggagttactatagggaatagc
ctaagacgaattcttctttcttctttagaaggttttgctattacttcagtaaaaattgaa
ggagtcaatcatgaattttcgacaataaaaggagtaatagaagatgtgacagacattatt
cttaattgtaaaaaaatacgattcaaaaaatctagtgatttaaaaagcactaaagaagaa
gtaacggtttgtataacagataaagagaaaattacagcgggagattttggacaatttatt
tctggatttcaagtattgaacccagatcttattatatgcaataaaaacaaatctattcct
tttaatattttctttattatagaaaaaggtcgtggatatgtacctgctgaagcaaataaa
aaatatgaatctaccataggaactattgcgattgattctatatttacaccaataaaaaat
gtaaaatatactgtggaaaattgtaggtttgaaccaaaaacagattatgaaaaactttct
atagaaattcaaacagatggttctatctcacctaaagaggctttgatagaagcttctaaa
attctaataaatcactttatgttatttaatgagaataatatttctaccgagagtccaaat
cttacagaactttctgaatatactgtatattttgaaaaattgttgaattctaatctgtcc
gaacttggcctatcggtaagagcacaaaactgcttaaaatcagcagaaatttttacgtta
agacaactaataagtaaaaccgaaacagatctaaaaaaattgaaacattttggaataaaa
actttgaatgagataaatatatttttagaaaaaaaaggtttgggtagagttaaaaaataa
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