Escherichia coli W: ECW_m2838
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Entry
ECW_m2838 CDS
T02002
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
elw
Escherichia coli W
Pathway
elw02024
Quorum sensing
elw03060
Protein export
elw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ECW_m2838 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ECW_m2838 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECW_m2838 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
elw02044
]
ECW_m2838 (ffh)
Enzymes [BR:
elw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ECW_m2838 (ffh)
Secretion system [BR:
elw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ECW_m2838 (ffh)
Eukaryotic Sec-SRP protein
ECW_m2838 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_16
AAA_31
NAT10_TcmA_helicase
nSTAND_NTPase5
AAA_33
AAA_24
APS_kinase
T2SSE
AIP3
GlnD_UR_UTase
AAA_14
TsaE
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ADT76251
UniProt:
E0J703
LinkDB
All DBs
Position
complement(2917367..2918728)
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AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgcctcactgaagacaacgtaaaagatacgctgcgcgaagtgcgcatggcgctgctggag
gcggacgtcgctctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaataagagcctgacgccggggcaggagttcgtcaaaatcgtccgtaac
gaactggttgcggcgatgggcgaagagaaccagaccctgaacctggcggcgcaaccgcct
gcggtcgtgctgatggcgggcctgcaaggtgccggtaaaacaaccagcgttggtaaactc
ggtaagttcctgcgcgagaagcacaagaagaaagtgctggtggtttctgccgacgtttat
cgcccggcggcaatcaaacagcttgagacgctggcagagcaggtgggcgttgatttcttc
ccttctgatgttggtcagaagccggtagatatcgttaacgcggcgctgaaagaagccaaa
ctgaaattctacgacgtgctgctggtggataccgctggtcgtctgcacgttgacgaagcg
atgatggacgagatcaaacaagtccatgcgtcgattaacccggttgaaaccctgtttgtg
gttgacgccatgaccggtcaggatgcggccaatacggcaaaagcattcaatgaagcgtta
ccgcttaccggcgtagtgttgaccaaagtggacggcgatgcccgcggcggtgcggcgctc
tctattcgtcacatcactggcaaaccgatcaagtttctcggtgttggcgagaaaactgag
gcgctggagccgttccatccggaccgcatcgcgtcgcgtattctcggcatgggcgacgta
ctgtcgctgatcgaagatatcgaaagcaaagttgaccgcgcgcaggcagagaaattagcc
agcaagctgaaaaaaggcgacggcttcgatctcaacgattttcttgagcaactgcgccag
atgaaaaatatgggcggcatggctagcctgatgggcaagctgccgggcatggggcagatc
ccggataatgttaagtcgcagatggacgataaagtgctggtgcgtatggaagccatcatc
aactcgatgacgatgaaagagcgcgctaagccagaaatcatcaaaggttcgcgtaaacgc
cgtattgctgccggttgcggtatgcaggtgcaggacgttaaccgtcttctgaaacagttc
gacgacatgcagcgcatgatgaagaaaatgaagaagggcggaatggcgaagatgatgaga
agcatgaagggtatgatgcccccaggcttccctggtcgctaa
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