KEGG   Epinephelus lanceolatus (giant grouper): 117247267
Entry
117247267         CDS       T07331                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ely03037]
    117247267 (ift140)
Cilium and associated proteins [BR:ely03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   117247267 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EML TPR_IFT80_172 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 TPR_GEMI5 Clathrin Beta-prop_CAF1B_HIR1 TPR_COPA_B TPR_12 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st RNase_HII TPR_2 Consortin_N DUF3485 Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 117247267
NCBI-ProteinID: XP_033467568
LinkDB
Position
21:17994333..18024999
AA seq 1449 aa
MAVYFDHRIEAPESSGVPSQLTWHPALPLLAVGSSSHTTGGNVDLYLQQGEYVESCHLER
PHQPAVLHWHPMKPVLAVGWENGETVLLTHPSGDQTVLPNTHSACITLLEWSSSGSRLVT
GDQTGVLAVWKVDARGRLQGNHLVKHEYNKPLTCCIFRPASPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLTFYISTADGKVHSVDEHCKTSTLLCVEGAIKKLFYLEKREA
LAVITETMMLSQYTLGPEGGAKEFIKVKLSSKTGQNVDIVWTENSLLITATGEQVIRLWD
LDGDDNYVLHLDETLGYERGEMINCVSYCAGKEILAAGTSHGRIAMWKMVVQSGSSRGDA
KAQWKLQTPTETEGNVIQLQWGSSLNLLAANNSNTVRILCEHVMSAHFSQQVAAVQLAPT
QLSITQFTSGAHLALQSDIHIKGVCVTKDSVTVWSGKQVTVYELSGTALRNTGSFLCDSH
VVAVHGENLYTLEPNRVQIRTPQGTVKQLLTFTKAEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLTDQIANLGALRSVKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFIGRPSSGISQPEESDRQQFQGAELSGRCPVSHYWDESEPRLFVCETVPIS
SESSSTDFLDMVDVSVVTLYCTQEHGLLLQDCYPKPSGLQALLALDVPYYYFSCKPGESD
PGLPEISATTSAPPQQTHPSRSSAAQFPHMVSRRALRDFVGLENCEKATRDAMLNFSFYL
TIGDMDEAFKSIKLIKSKAVWENMARMCVKTRRLDVARVCLGNMGNARAAKALKEAEAEP
EPEAQVAMLAIQLGMLEDAEKLYKSCQRYDLLNNFYQALGQWQQALETAESHDRIHLRTT
YYNYAKYLESMGDKSLALAYYENSDTHRVEVPRMLQDDTSSLEIYVNKMKDKNIYKWWAQ
YLESQSDMDSALRFYECAQDYLSLVRVQCYMGNIQKASEIANDTGDRAASYHLARHYEGH
DDIRQAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNAEDMMEAACYYEEKGTHMDR
AVSLYHKAGYVSKALELAFATQQFSALQLIAEDLNEYSDPALLARCSDFFITHSQYEKAV
ELLVAAKKYHQALELCVTQSLTITEELAERMTVTDSKDLSEEARKELLERIADCCMRQGN
YHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFATISRQKELFIMAANYLQSLDWRKDPE
ILKTIIGFYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAYKCLSKAKDSSSGQ
HEVKLADLQHRVTLIKKFVLARRLYAEDAGEAVRLCEALLEEPELDPAVRIGDAFGFLVE
HHCQQGNYQVAYRKLEELQKLLPSQNVRYYVSQASLEALQKELGIPMERGEHRHNVKEED
EVEEDLNVS
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgtattgaggcccctgaaagtagtggtgtgccctctcag
ttgacctggcacccagctcttcccttactggctgtaggctcaagcagccacaccactgga
ggcaatgtagacctctacctgcagcagggagagtatgtggagagctgccatttagagcgt
ccccatcagcctgcagtgctgcactggcatcccatgaagccagtgctggcagtaggctgg
gaaaatggagagacagtgctactgacacacccttctggagatcaaacagtccttcccaac
acacactcagcctgcatcacactgctggagtggagcagctctggcagccgcttggtaact
ggtgatcagactggagtgctagcagtatggaaggtagatgccagagggagacttcaagga
aaccatctcgtgaagcatgaatacaacaaacctctgacttgctgcatctttagaccggcc
tcgcctggggatgatgtggcaatgctagcccgggcatcagtcagtggagatgagagtgct
ctggacatgttcagctggaagggagcgcctcttaagatgggcccacaggagggactcaca
ttctacatcagcactgcagatggcaaggtccatagtgtggacgagcactgtaagacaagc
actcttctctgtgtggagggtgcaatcaagaagctgttctaccttgagaaaagagaggcg
cttgctgtcatcacagagaccatgatgttgtcacagtacactcttggacctgagggagga
gccaaggaatttataaaggtgaagttaagcagcaagactgggcaaaatgttgacattgtc
tggacggagaacagcctcctcatcacagcaacaggagaacaggttatcaggctatgggac
ctggacggagatgacaactatgttttgcatcttgacgagactctggggtacgagagagga
gagatgatcaactgtgtttcatattgtgcaggaaaagaaatcttggcagctggtaccagc
catgggcgcatagcaatgtggaagatggtggtgcagtcaggcagcagcagaggtgatgcc
aaggcccagtggaaactacagacacccacagaaactgaaggaaatgtcattcagctacag
tggggctcgagcctgaatctgctggcagccaataattccaacacagtgcggatcctgtgt
gagcatgtgatgtcagcccacttcagtcagcaggtggcagcagtgcagcttgccccaact
cagctcagcatcactcagtttacatcaggagcgcaccttgccctacagtctgacatacac
attaagggagtctgtgttacaaaggattcagtgacagtctggagtggcaagcaggtcact
gtgtatgagctttcagggacagctcttcgcaatacagggtcatttctttgtgactcccat
gtcgtagctgtacatggtgagaacctctacactttggaacctaacagggtccagattcgc
acgccacagggcaccgtgaagcaactgctgaccttcacaaaggcagaaggcaaccctgta
ctactcagtgtgtgtcagtcttacctggtggtaggcacagacacagcacacattagagta
tttgacctctccagaagagacgccaaagctcactgcagtgctaagaacctgactgatcaa
atcgccaatctgggagccctgaggtcagtcaaatgtaatgccaacggcagccaagtcagc
atcctaatctctcaggttaatgggcgaccagatcacaaagtgtacttttatgacgttgag
atggacactgtgacacactttgacttcttcatcggcagaccgtccagtggtatctcacag
ccagaagaaagtgacaggcagcagtttcagggggcagaactcagcggtcgctgccctgta
tctcactactgggacgagagtgaacctcgcctttttgtttgtgagactgtgccgatcagc
tctgaatcctcatcgactgatttcttggatatggtggatgtgtcagtagtgacactctat
tgtacgcaggagcacgggctcctcctacaggactgctaccctaaaccatcaggcctacag
gcgctccttgctctggatgtgccctactattatttcagctgcaagcctggtgagagtgat
ccagggttaccagagatttcagccacaacgtcagcacctccacagcagacccatccatca
aggagctcagctgcccagttccctcacatggtatccaggcgagctctcagagactttgtg
ggcctggagaactgcgagaaggcgacccgcgacgccatgctcaacttcagtttctacctg
accatcggcgacatggatgaagccttcaagtctatcaagctcatcaaaagtaaagcggta
tgggaaaacatggcacggatgtgtgtgaaaacccgccgactggatgtggcacgcgtgtgc
cttgggaatatgggaaatgccagggcagcaaaagcactaaaggaggcggaggctgagcct
gagccagaagcacaagtggcaatgttggccattcagctcggcatgctggaagatgcggaa
aagttgtacaagagctgtcagcgctatgacctgctgaacaacttctaccaggctctcggc
caatggcagcaagctttggaaacagcagagagccacgatcggatccacctgcgcaccacc
tactacaattatgccaaataccttgagtccatgggagacaagagcctggccctcgcatat
tatgagaactcagacacacacagagtcgaagtgcccagaatgctccaggacgacacatca
tctctagagatctatgtcaacaaaatgaaagacaagaacatctataagtggtgggcccag
tacctggagagccagtcagacatggattcagcgctgcgtttctatgaatgtgcccaagat
tatctctcactggttcgagtccaatgctacatggggaacattcagaaggcatctgagata
gccaatgatacaggtgacagggcagcatcataccacctggctaggcactatgagggccat
gatgatatcagacaggctgtccacttctacacacgagcccaggcctacaacaatgccata
cgactttgtaaggagaatggtctggatgatcagctgatgaatctggctctgctcagtaac
gcagaggacatgatggaggctgcctgttactacgaggagaaaggcacccacatggaccga
gccgtctcactctaccacaaggctggttatgtctccaaagctctggagctggcctttgcc
acccagcagttctctgcactccagctgattgctgaggatctaaatgagtactctgaccca
gccctcctggcacgctgctccgacttcttcatcacgcattcccagtatgaaaaggctgtg
gagttactggtagcagccaagaagtaccatcaagccctggagctgtgtgtgacccaaagc
ttgaccatcacagaggagctggcagagagaatgactgtgactgattcaaaagacttgtct
gaagaggcccgaaaggagctgctggagaggatagcagactgctgcatgcgtcagggcaat
tatcacttagccacgaagaaatacacacaggccggcaacaagctcaaggccatgagggca
ctcctcaagtcgggtgacacagagaaaatagtattcttcgccactatttctcgccagaag
gagcttttcatcatggccgccaactacctccagtctctggactggcggaaggatccagag
atcttgaagacaatcattggtttctacaccaaaggcagggcaccagacctactggctggc
ttctatgaagcctgtgctcaggtggagattgatgattaccagaactatgaaaaggcttta
gacgctttgactgaggcttacaagtgcctctcaaaagcaaaggactcttcatctggacaa
catgaagtaaaactggctgacctgcagcacagagtcacactaatcaagaagtttgtcctc
gcacgcaggctgtatgcagaggatgctggtgaggcagtgcggttatgtgaagctttgctg
gaggagcctgagttggaccctgcagtcaggattggcgatgcatttggattcttggtagaa
caccattgtcagcaaggcaactaccaagtggcctaccgtaagctggaggagctccagaag
cttttgccatcgcagaacgtcaggtactacgttagccaggccagcctagaggccctgcag
aaagagttgggtatacccatggagcgtggtgaacacaggcacaatgtgaaggaggaggat
gaagtggaggaagacttaaatgtctcttaa

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