Epinephelus lanceolatus (giant grouper): 117252751
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Entry
117252751 CDS
T07331
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117252751 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117252751 (ttc37)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117252751 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_17
TPR_19
TPR_16
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
ANAPC8
TPR_15
ARM_TT21_C
Fis1_TPR_C
PknG_TPR
Loricrin
Motif
Other DBs
NCBI-GeneID:
117252751
NCBI-ProteinID:
XP_033475769
LinkDB
All DBs
Position
4:complement(28236149..28252687)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKAELPNIYQKLVELYASSDKKKCYEMIN
KLSEIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWLQMTQLLSDCHNEGEQDNET
QQHLITAFEKAMVLMDPVPGEEHKKASADYIKCLSKLPQEEAKMKEACESMLSHYPNQSY
PLEVLCSHYLKTGVQDEDAVSCFSRLLDLAPNSGLGHLGLGTKALQEGRFKDAIKDLAQG
LKKMSSSTGWCSLAEAQLKMQRYADSAVSCSQGLTVCASGDKELRVKLLKLKLEALVRSG
GEKAADQALETFSQIPVSEKDPVILALQGRAHLNKGQTDEALKLSSELVVSNPNLAQGFE
LRGLAQLAQGQQQLAEESFLKAVSQSPDCGEYYFLLGRLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYREVAKDLGRARGCYKKAFEIDNDDTESGAASVDLSMEQDDM
ETALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRVQVLVPAPLAGLDPNIQSHTLNQVQLLKVGERCYARALKLMSEVPSLWYDL
GLNYYRQSSLTCPTDGDQNSPSHLLEKAQQCLKKAIMMDSGNHSYWNALGVVSMSKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELNTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYRRAVDLLQSMSSTEELAFA
LGSYGRALCTAGQSEEAVRVYNSTPLQELSDLAGLALAYCRAGLIPESISAYERALAVAS
SEKDKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHRDATLAA
AALTELLKQGSASGNVIEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPKKANGGAVAGHVACLSSMTQGKRALLYSGVNQLAGGRHSGEDSHRNALKTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEQTLMSVVSEKVHNVEEIERPL
AQSLEGWVLQQAVTGLMLGGQLEQAETLCSQVLNVSPEHPAVMLSLRQVQCQRLLVADGG
AVLPDTVLEQLSNTVIMNPTNLGAWHWLAEVYRSQGLLVQAVMAYKQSLQLASQLGLHSS
QVSSLLRLALLALGTCMAGVPGDDWKNMIQEATTEVLKLGSSPMAQLFQGLLQYVTKMAA
RETRRLLERVAYAQDFPVTVVQVASWYLLRHLHAKNDEELMNVLLHHAKMNGDQRLLEFN
SLLASSSA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaagaagtgaaaacagcactgaaaagtgccagagaggccatcaaaaacaag
gagttcaaagaggccctaaaacactgcaaggccgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcagccagtgaactggagcaaccagatcaggcacag
acggcctataaaaaggctgtggagctggagcctgagcagctgctggcatggcagggcttg
gcaaatctttatgagaagactgatcagtgggatttcaaagctgagctgccgaacatctac
cagaagcttgttgagctgtatgcaagctctgacaaaaaaaaatgttacgagatgatcaat
aagctgtccgagatctatcagtctgaaaaggaatatttaaagttggcaaaggtttggctg
cagctcatccaggtgaaggaggaagaggctgtggacaagaaagagttactgcagctgtgg
ctacagatgacccaactcttgtcagactgccataatgagggagagcaggacaatgaaact
cagcagcatttaatcacagcatttgagaaggccatggttctcatggatcctgtaccagga
gaggagcataagaaggcctcagctgactatatcaaatgtctttctaaactgccacaagaa
gaagccaaaatgaaagaggcgtgtgagtccatgctgtcccactaccccaaccaaagttat
cctcttgaggtcctgtgttcgcactacctcaaaacaggtgttcaggatgaggatgcagtc
agctgtttctcccgtctcctggatctggctcctaacagtggattaggtcacttgggactg
ggaaccaaagcactgcaagaaggaaggtttaaagatgccattaaggaccttgcacaaggg
ttgaagaaaatgagctccagcacaggatggtgcagcctggctgaagctcagcttaaaatg
cagagatacgcagacagtgctgtatcatgctctcaaggtctgactgtgtgtgcttctgga
gacaaggagctgagggtcaaactgctgaagctgaagctagaggctttagtcaggagtgga
ggagagaaggctgcagaccaggctttggagacattttcacagatcccagtttctgaaaaa
gacccagtgatattagcccttcaaggacgtgcacacctcaacaagggacagactgatgaa
gcacttaagttgtcatcggagctggtggtctcaaaccctaacctagcccaggggttcgaa
ctgagaggactggcacaactagctcagggtcagcagcagctggcagaggagagtttccta
aaggcagttagccagagcccagattgtggagagtattatttcttgctgggacgactctac
tgggacatgggagaagagacccgtaaagacagaagcaaagctcatacacatttgctcaag
gctgcaaagttagacccacaccttggttgtgtattccgctacctcggacattattaccgt
gaggtggcaaaggatcttggccgggcacggggctgttataagaaggcctttgagatagac
aacgatgatactgagtctggagctgcctcagtggatctcagtatggagcaggatgatatg
gaaactgccttagcaatacttcagtcagtgattgagaaagccactccaggctcagctaaa
tgggcttggatgagacgagggctatattacctgaaggtcggagagcatcaacaagctgta
gctgacctgcaggcagcgctgagagcagacccagaggactgggtatgttgggagtgttta
ggcgaggcctacttaaaccgccggagcttcacagcagctctgaaggcctttggtaaggcc
catcagcttcagccctcttccatctacagtgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcaaagaggcggttgcagagtatttgcagatcacagcgcagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaggtttaatggaa
gactgcagagatgggggagccatcgacctcattcagcaagccatacagaacctcttcaga
gctgtagagctgcgtccagatctgtcctgtctgtggaagctgctgggagatgcatgtacc
gccgtcagcaccgtgtctccaaacagagtccaggttctagtgcccgcccccctggctggt
ttagaccccaacatccagagccacacactgaaccaggtccagctactcaaagttggtgag
agatgttatgcccgagctttgaagctgatgtctgaggtccccagcctttggtatgaccta
ggactcaactattaccgccagtcgagcctgacctgccctacagatggagaccagaactct
ccatctcatctcctggagaaggcccagcagtgtttaaaaaaggctatcatgatggacagt
gggaaccacagctactggaacgccctgggagtggtttctatgagcaaaggtcttgagaac
ttcgctctggctcagcattgcttcatcaagtccatacaagttgaaccaaataatgttgtt
gcttggaccaaccttggtaccttgtatttgaagaaggacaatatagagcttgcacacgag
gccttcaagattgcccagtcactggagccgctttatgtcaactgctggattggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcaacacacatatggagggagtgaaaggttatgcctactgggtatgttccaccttgctg
gataagagcaacagagactctgagctgtaccgctacaacatagtacagatgaacgccatc
tctgctgctcaggtggcgctcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcatcatgcttggctacctgaatgagcatctgcaactgaagaggcaggccttacaggcg
tacagaagagctgttgatctgcttcagtccatgtcctcgacagaagagctggcttttgct
ctgggcagctatggccgtgccttgtgcaccgcaggccagtcagaggaggcagtgcgtgtt
tataattccactccactgcaggagctcagtgatttggctgggctggctctggcctactgc
agggcaggacttatcccagagagcatcagcgcctatgaacgtgccttagctgtggcttcc
agtgagaaggacaaggcttacatcttgacagctctggcgttgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtctatgtgccctgggattggtgcacagggatgctacgctagctgct
gctgccctgaccgagctgctaaagcaaggttcagcctctgggaatgttatagaacagcga
tgtctactcacctgcgccttgctcgccctgcagggcaactacagcgcggtgcagagagag
gcttcccgagctgtgcacagcaatcctggaaacccatctctgtgggctctgctgtccagg
ctggtaccacaatattatcccaagaaggcaaatggtggagcggtggctggtcacgttgcc
tgtctctccagtatgacccaaggaaagagggcgctattgtacagtggcgtgaaccagctg
gctggtggaagacactctggagaggacagtcacaggaatgcactgaagactatgcagaga
gctgtgttgctttgtcctgatgatccggcaacgtgggcaggattaatggctgcctgtcac
acagaaaacacctcctgttatctttcaggctctgctccctgtagacaaggcctggagcaa
accctcatgtcagtggtgtctgagaaagtgcataatgtggaggagatagagcgtcctcta
gcccagagtctagaaggttgggtgctacagcaggcagttactggtctcatgctgggggga
cagctggagcaggcagaaaccctttgctcacaggtgctgaatgtttctccagaacaccca
gcagtgatgctgtcgctgaggcaggtacagtgtcagcgcctccttgtggccgatggtggt
gctgtcctcccagacactgtgctggagcaactaagcaacactgtgattatgaaccccacc
aacctgggggcttggcactggctggctgaggtgtatcgtagccagggcctcctggtccag
gcagtgatggcttacaagcagagtctgcagctggcctcacagctcggcctgcacagcagc
caggtatccagcctgctccgactagccctgcttgccctgggaacttgtatggctggtgtc
ccaggagacgactggaaaaacatgatccaagaagccaccactgaggtcttgaagctgggt
tcatcccccatggcccagcttttccagggtctgctccaatatgtgaccaagatggctgct
agggaaacaaggcgtttgttggagagggtggcatatgctcaagacttcccagtgacagtg
gtgcaggtggccagctggtacctcctcagacacttgcatgcaaaaaacgacgaggagcta
atgaatgtccttttgcaccatgccaaaatgaatggagatcaaagactgctggagtttaat
tcactgcttgcctcttcttcagcttga
DBGET
integrated database retrieval system
