Epinephelus lanceolatus (giant grouper): 117255090
Help
Entry
117255090 CDS
T07331
Name
(RefSeq) semaphorin-5B-like isoform X1
KO
K06841
semaphorin 5
Organism
ely
Epinephelus lanceolatus (giant grouper)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_spondin
PSI
TSP1_ADAMTS
Antistasin
Motif
Other DBs
NCBI-GeneID:
117255090
NCBI-ProteinID:
XP_033479548
LinkDB
All DBs
Position
6:18459113..18512182
Genome browser
AA seq
1092 aa
AA seq
DB search
MVTSGWGAWALSPCGLVLIICSSVCLSQQPHIKPVDCSRKEHPVVSYQALRPWMSEFSHP
GVKDFSQLALDLSRNQLIVGARNFLFRLNLSDASLIQEAEWAPDEDTKRSCQSKGKSEEE
CQNYIRVLLISGGTLFMCGTNAFTPVCINRKIDNISQVLDTVNGVARCPYDPRHNSTAMV
TERGELYAATVIDFSGRDPVIYRSLGNMPPLRTAQYNSKWLNEPNFVSVYEIGRFAYFFL
RETAVENDCGKIVFSRVARVCKNDMGGRFLLEDTWTTFMKARLNCSRSGEIPFYYNELQS
TFYLPEQDLIYGIFTTNVNSISASAVCAFNLSSITQAFNGPFRYQENPRTAWLSTPNPIP
NFQCGTLEEGGPGGNLTERSLQDAQRLFLMNDVVQPVTINPLLTQDNLRFSKLVVDIVQG
RDTLYHVMYIGTEYGTILKTLSTTNKSLQGCYLEELRLLPQGQIGPIKSLQILHSDRSLI
VGLDDRLVKIPLERCSSYPTERQCMEARDPYCGWDHKQKHCTTIEESSNMNQWTQNITEC
PVRNLTQDGGFGSWAPWQPCNHDDGEGSVSSCACRSRSCDGPLARCGGVECKGPTIQVAN
CSRNGGWTPWSSWGQCSSSCGIGFEVRQRSCNNPSPRHGGRICVGQGREERLCNEKKPCP
LPVLWTAWGPWAHCSAECGGGVHSRTRTCENGNSCPGCSTEYKACNLEACPEVRRNTPWT
PWMPVNVSQDGSRQEQRFRYTCRALLPDPQQLQLGKKKMETRFCPNDGSGACQTDSLVED
LVKTSGRTLSQPQGVRWGLWETWSSCSQQCSRGFRTRKRSCSTAEGRTNPSACVGSPVEY
QDCNTKPCPVSGAWSCWSSWSQCSASCGGGHYQRTRTCSNPPPASGGDICIGLHTEEALC
NTHACEDWGEWTEWGDCDEDGRQHRTRRCSEDQQAEASLCQGNITQSRPCQPHEVPVILP
GQEDQSCGTFTLFQLVAVGSASFFAAALLSALAYTYCHQLNRPSAESAVIHPSTPNHLTY
NKQGNATPKNEKYIPMEFKTLNKNNLHVNDETCNHFPSPLPSSNMFTTTYYPPSLSKYDF
HPDSPCRTYMHS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggttacgtcagggtggggggcgtgggccctctccccctgtggcctcgtgctgatcatc
tgttcgtctgtgtgtctgtcccagcagcctcacatcaaaccagtggactgtagtcgaaag
gagcatcctgttgtctcttaccaagcgctgaggccgtggatgtcggagttctcccaccca
ggagtgaaggatttctcccagctggccctggacctgagcagaaaccagctgattgtggga
gcaagaaacttcctctttagactgaatttgagtgacgcctcgcttatacaggaggcagaa
tgggcgcccgatgaagacacaaagcgctcatgtcagagcaaggggaagtctgaggaggag
tgtcaaaactacatccgggttttgcttataagtggggggacgctcttcatgtgtggtacc
aatgctttcaccccagtctgcataaacaggaagattgataatatcagccaggtgttggac
acagtgaatggtgttgcccgctgtccctatgacccacgccacaactccactgccatggta
acagagcggggcgagttgtatgctgcaacagtgatcgacttctcaggacgtgaccccgtc
atctacaggagcctggggaacatgccgccactgcgcaccgcccagtacaactccaaatgg
ctcaacgagcctaatttcgtgtctgtgtatgagatcggtcggtttgcctacttcttcctg
agagaaactgctgttgaaaatgactgtgggaagatagtgttctctcgcgtggcccgggtc
tgtaagaacgatatgggtggacgtttcctgttggaagacacctggaccaccttcatgaag
gccagactcaactgctcacgctcaggagaaatccccttttactacaacgagctgcagagc
accttttacttaccagagcaggacctgatctatggcatcttcaccactaacgtgaacagt
atatcagcttctgccgtctgtgccttcaatctgagttccatcacccaggccttcaacgga
cccttccgctaccaggagaacccccgcaccgcctggctctccaccccaaaccccataccc
aattttcagtgtggcacactggaggagggaggtcccggggggaacttgacagagcgcagc
ctccaggatgcccagcgactcttcctcatgaacgatgtggtccagccggtcaccatcaac
cctctgctcacccaggacaacctgcgattctccaagctggtggtggacatcgtgcagggc
cgagacaccctctaccatgtcatgtacattggcactgagtacggcaccatcctgaagact
ctctccacaaccaataaaagccttcaaggctgctacctggaggagctcaggcttctccct
caagggcagatcggaccaatcaagagcctgcagatcctccacagtgacagatctctgata
gttgggcttgatgacagactggtgaagatcccattagagcgctgctccagctatccaact
gaacgtcagtgcatggaagctcgggacccttactgcggctgggatcacaaacagaagcac
tgcaccaccatcgaggagagctccaacatgaaccagtggacccaaaacatcactgagtgc
ccagtgaggaacttgacacaggatggcggttttggttcttgggcgccatggcaaccttgt
aaccatgatgacggcgagggctccgtcagcagctgtgcgtgccggtcacgctcgtgtgac
ggacctctggcccgatgtggcggggtcgaatgtaaaggcccaactatccaggtggcaaac
tgttccaggaatggcggctggactccctggtcttcatggggccagtgcagcagcagctgt
ggtatcggatttgaggtgaggcagcggtcctgcaacaacccctctcctcgccacggcggt
cgaatctgtgttggccagggtcgagaggagaggctgtgcaatgagaaaaagccgtgtccc
ctgcccgtgttgtggacagcgtggggcccctgggctcactgcagtgctgaatgtggaggg
ggcgtccactccaggaccagaacctgcgagaatggcaacagctgtcctggatgctccacg
gagtataaggcctgtaacctggaggcctgccctgaggtgcgccgcaacaccccctggact
ccctggatgccagtcaatgtcagtcaagatgggtcaaggcaggagcagagattcaggtac
acctgccgggcactgctccccgacccccagcaactccagctgggcaagaagaagatggaa
acccggttctgccccaatgacgggtctggagcctgccagactgactctctggttgaagac
ttggtgaagactagtgggcgaactctgtcccagccccaaggtgtgcgctggggattgtgg
gaaacctggtccagctgttctcagcagtgttccagaggcttccgaacccgcaaacgtagc
tgctcgaccgcagagggcaggaccaaccccagcgcctgcgtaggatccccagtggagtat
caggactgcaacactaaaccgtgcccagtgagtggagcctggtcctgctggtcctcctgg
tcacagtgctcggccagctgtgggggcggacactaccagcggactcggacgtgcagcaac
ccaccacccgccagcggaggagacatctgtataggcctgcacactgaggaggcgctctgt
aatacacatgcctgcgaagattggggtgaatggacagagtggggggactgtgatgaagac
ggtcggcagcatcgcactcgtcgctgcagcgaggaccagcaggctgaggccagcctctgc
cagggtaacatcacccagtcccggccctgccagcctcacgaggtgccagttattttaccc
ggacaggaggaccagagctgtggaacctttactttgttccagttagtagctgtgggctcg
gccagtttcttcgcagcagcattactgtcagcactggcctacacctattgccaccagctg
aaccgaccatcagcagagtctgcggtcatccaccccagcacacccaaccacctcacctac
aacaagcagggcaacgccacgccaaagaatgagaaatacatccccatggaatttaagact
ctaaacaagaacaatctccacgtgaacgacgagacgtgcaaccacttcccctccccgctg
ccctccagcaacatgttcaccaccacctactacccacccagcctgagcaagtacgacttc
catccagactccccctgcaggacctacatgcacagctga
DBGET
integrated database retrieval system