KEGG   Epinephelus lanceolatus (giant grouper): 117258988
Entry
117258988         CDS       T07331                                 
Symbol
si:rp71-17i16.4
Name
(RefSeq) troponin C, skeletal muscle
  KO
K12042  troponin C, skeletal muscle
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04020  Calcium signaling pathway
ely04814  Motor proteins
ely04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ely00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    117258988 (si:rp71-17i16.4)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    117258988 (si:rp71-17i16.4)
   04820 Cytoskeleton in muscle cells
    117258988 (si:rp71-17i16.4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ely04812]
    117258988 (si:rp71-17i16.4)
Cytoskeleton proteins [BR:ely04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     117258988 (si:rp71-17i16.4)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_8 EF-hand_FSTL1 EF-hand_9 AIF-1 EH SPARC_Ca_bdg EF-hand_11 p25-alpha EF_EFCAB10_C EF-hand_EFHB_C DUF5580_M
Other DBs
NCBI-GeneID: 117258988
NCBI-ProteinID: XP_033486145
LinkDB
Position
8:39857078..39871312
AA seq 161 aa
MPTDAQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFLDREEFGDI
LHQTGESVAEEDIDEMFGEADTNKDGKIDFDEFLKMMENVQ
NT seq 486 nt   +upstreamnt  +downstreamnt
atgcccactgacgcccaaagcgatgcccgctccttcttgacggaggagatgattgcagag
ttcaaggccgcctttgacatgttcgacactgatggtggcggtgacatcagcaccaaggag
ttgggtaccgtgatgaggatgctgggacagaacccatcaagggaggagttggatgccatc
attgaggaggtcgatgaggatggcagcggtaccatcgacttcgaggagttcttggtcatg
atggtgcagcagttaaaggaggaccaggctggaaagagtgaagaagaactttcagaatgc
ttccgtatttttgacaagaacggagatggtttccttgatcgggaggagtttggtgatatc
ctccatcagactggagaaagtgttgcagaggaagacattgatgagatgttcggtgaagca
gacacaaacaaagatggaaagattgattttgatgagtttctgaagatgatggagaacgtc
cagtaa

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