Epinephelus lanceolatus (giant grouper): 117260312
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Entry
117260312 CDS
T07331
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117260312 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117260312 (cngb1a)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117260312 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
PAZ_4
Motif
Other DBs
NCBI-GeneID:
117260312
NCBI-ProteinID:
XP_033488184
LinkDB
All DBs
Position
1:complement(48433047..48473980)
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AA seq
1295 aa
AA seq
DB search
MPNSELAYKPIDRQNAKEKGMIAWIAQGLEKVVPKPELNKKETAAEAAAAAAEPPAEVRP
TAVADKAAEPPAAVVAEKSVQQDKTDTNPPPPPPRMIDWIKQGIEKVVPQPELPVRSKTE
VSEKTEAPAAPKAETPAPKPAPVPKPAPAPEPPPAPKPAPKPADDTEKSPKEAEPQPNMM
GWIVSEIGRMLPQPVQKQDSSSDEVQNISIVQKKTDLVLEDIGQEEVKEEEEKEKEKGDA
ETQMDQSAPLMVSIKEEVGEAVLAQMEERLQQGRLEAARIAEEMARKAAEEAVRQLEVEH
SAKIVIETLPESNKQLPNILEEENEDDPELQNLQEDSDDSTDNKCPEEIKKTAVEEENKP
DKTMMDVCPIEDEASPSSTDVEPASERRDLESPVSQTITQQPESQAEAPPTSTTTTDQAA
AAEGECRVPDICSSITSFLLRFPRVAECLQSCRRLMHEHDLTPSKLSMPTPPPELAQLTQ
ELSQFPKQARQCCMSIAGRFTRLTATSQQPQQPSFTLPIITPIMIHSSTLLHHQLPARHP
AAPVLRVEDVEQEKGLNIPKIITTSEPEFRSLSVPNVLLSKLSPSGDLSADEDDDEPSKS
GLKTWSSQGDLLTADNEIRPLSAASVGSVVIQDRLSDLVRMFRGRTERQKERLVDPDESE
EESPSASPSKPPPPPPPPPEEKKDDTPAAAEEEEDEKEYVLPFELLGRPVKIPKLPKLPP
MPDWLRVILEYRFPSSIDPFGDLIYVLWLFCVVAAWNWNVWLIPVRWAFPYQTPENIHLW
LLMDYTCDLIYITDILVFQPRLQFVRGGDIVCDKKDMRENYMTTERFKMDIISLFPMEIF
YYFTGVNSLLRFPRLLKYMVFSEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYW
GSDYEGLGSTKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFA
FSIMIGQMRDVFGAATAGENYYRACMDSTIKYMTSYNIPREVQNRIKTWYDYTWKSQGML
DEQELLVQLPAKMRLDIAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCK
KGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGF
ANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKKPDEKAAGKEAVQVIPPRPDTPE
MFKAALKVTEQVGIEGVFSKLKTSYKPSESSAEVLPSISPVPPPSPMHRRSPVPLTAVQD
DDDAVSETADSSVIIRMTPRPQGEEVLTVEVAPGD
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatagtgagcttgcctataagcccatcgacaggcagaatgccaaagaaaaaggg
atgatcgcttggatcgctcagggtttggagaaagtcgttccgaagcctgaactgaacaag
aaggaaacagcagcagaagcagcagcagcagcagctgagccgccggccgaggtgcgtccg
acagcagtggctgataaagctgcagagccgccggccgctgtcgtggcagagaaatcagtc
caacaggacaaaactgacaccaatccaccgccaccgccacccaggatgatagactggatc
aaacaggggatagagaaggtggttcctcagccggagcttcctgttcgctcaaagacagaa
gtcagcgagaagactgaagctcctgctgcgcctaaagccgagactccggcaccaaaacct
gctccggtaccaaaacctgctccggcaccagaacctcctccagccccgaaacctgccccg
aaacctgccgacgacacagagaagtctcccaaagaagcagagccgcagcccaatatgatg
ggatggatcgtcagtgagatcggtcgtatgttacctcagcctgtacagaagcaggactcg
agcagcgatgaggtgcagaacatcagcattgtacagaagaaaacagacctggtgctggag
gacatcggacaggaagaggtcaaggaggaggaggagaaggagaaggagaaaggagatgca
gagacccagatggatcagagtgctccactgatggtcagcatcaaggaggaggttggagag
gccgttctggctcaaatggaggaaagactgcagcagggtcgtctggaggctgcccgaatt
gcagaggagatggccaggaaggcagcagaggaggcggtccgacagctggaggtggagcat
tcggctaagatagtcatagaaacgctgccagagtccaacaagcaactgcccaacatcctg
gaggaggaaaacgaagatgacccagagttgcagaacctgcaggaggacagtgacgacagc
acagacaataagtgtcctgaagaaattaagaaaacagctgtggaggaagagaataaacct
gataagaccatgatggacgtctgtccgattgaagacgaggcctctccttcatcaacagat
gtggaaccagcatccgagaggagagacctggagagtccggtctcccaaaccatcacccag
caaccagagtcacaagctgaggcaccaccaacctccactaccaccacggatcaggccgct
gcagcagagggtgaatgtagagttcccgacatttgttcttcgattacgagctttctgctt
cgcttcccacgcgttgccgagtgtctgcagagctgcaggaggttgatgcatgagcatgac
cttaccccgtccaaactgtccatgccaactccacctccggagctcgcccagctgacccag
gagctgtctcagttccccaagcaggcgcgccaatgctgcatgagcatcgccggccgcttc
acacgccttaccgccacctcccagcagcctcagcagccttccttcaccctccccatcatc
actcccatcatgatccacagctccacactgcttcaccatcagctgccagctcgccatccc
gcagctccggtgctgagggtggaggacgtggagcaggaaaaaggcctgaacatccccaaa
attatcaccacctcagaaccagagtttagatctctgagtgtccccaacgtcctgctgtca
aagctcagtccctcaggtgacctgtctgcagacgaggatgatgatgagccgtcgaagagc
ggcctgaagacctggtccagtcagggagacctgctgactgcagacaatgagatccgccct
ctgtcagcagccagtgtcggcagcgtcgtgatccaggaccgtctcagcgaccttgtcagg
atgtttagaggtcgaacggagcgtcagaaagagcggctggtggacccggacgagtctgag
gaggagagtccttcagcctccccgagcaaacctccacctcctcctcctcctccaccagag
gagaagaaggatgacacccctgcagcagcagaagaagaagaagacgagaaggagtatgtg
ctcccttttgaacttctgggacgtccagtgaaaattcccaaactgcccaaacttccccca
atgcccgactggctccgagtcatccttgagtaccgcttcccctccagcatcgacccgttt
ggtgatctgatctacgtgctctggctcttctgtgtggtggcagcgtggaactggaatgtg
tggttgatccccgtccgctgggcgtttccgtaccaaacccccgagaacatccacctgtgg
ctgctgatggactacacctgcgacctcatctacatcactgacatcctcgtcttccagccc
agactgcagttcgtccgtggaggagacatcgtgtgtgataaaaaggacatgagagaaaac
tacatgaccaccgagaggtttaagatggacatcatcagcctgtttcctatggagatattt
tactatttcactggagtgaactctctgctgagattccctcgtctgctgaagtacatggtg
ttctctgagttcaacgacagaatggaggctgtgatgaagaaggcgtacatctacagggtg
atccgaacctccacctacctgctgtactctctgcacatcaacgcctgtctcttttactgg
ggctcagactacgaaggactcggatccaccaagtgggtttacaatggaaaaggcaacgct
tatatccgctgttactattttgccgtgaagacgctgatcaccatcggagggctgccggac
cccaccactgtctttgagatctgcttccagctcattaactactttgttggcgtctttgcg
ttctccatcatgatcggtcagatgagagacgtgttcggagctgcgacggccggtgagaac
tactaccgagcctgcatggacagcaccatcaagtacatgacctcctacaacatcccgcga
gaggtccagaaccgcatcaagacctggtacgactacacctggaagagccagggcatgctg
gatgaacaggagctgctggtgcaacttcctgccaagatgaggctcgacatcgctgtggac
gtcaactactccatcgtcagtaaagtcgccctgtttcagggctgtgaccgacagatggtg
ttcgacatgctgacgaggctcaaatctgtggtgtacctgcccggagactttgtctgtaaa
aagggggagatcggcagggagatgtacatcattaaacagggggaggttcaggtggtgggc
ggtcccgacctgcagacggtgttcgtcaccatcagagccggctcggtgttcggagagatc
agtttgctggcgggaggcggagggaatcgacgtacagctaacgtgaaggcgcacggattc
gccaacctcttcatcctggataagaaggacctggcagagatcttggtgcactaccccgag
tcccagaaactcctccgcaagaaggccaagacgatgctgacgaaggataagaagccagat
gagaaggcagcaggtaaagaggcggtgcaggtgatcccgccccgaccggacacccctgag
atgttcaaggcagcgctgaaggtgacggagcaggtgggaatagagggcgtcttctccaaa
ctgaagacaagctacaaaccgtctgagagctcagcagaggttcttccctccatctctccg
gtgccccctccctctccgatgcaccgccgctctccggtccctctcaccgcggttcaggac
gatgatgacgccgtgtcggagacggccgacagttcggtgatcatcaggatgacgccgcga
ccacagggggaggaggtgctgaccgtggaggtggcgcctggggactga
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