Epinephelus lanceolatus (giant grouper): 117260587
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Entry
117260587 CDS
T07331
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04020
Calcium signaling pathway
ely04510
Focal adhesion
ely04540
Gap junction
ely04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117260587 (pdgfc)
04020 Calcium signaling pathway
117260587 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117260587 (pdgfc)
04540 Gap junction
117260587 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117260587 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ely04052
]
117260587 (pdgfc)
Cytokines and neuropeptides [BR:
ely04052
]
Cytokines
Growth factors (RTK binding)
117260587 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
117260587
NCBI-ProteinID:
XP_033488463
LinkDB
All DBs
Position
10:complement(38432529..38515360)
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AA seq
364 aa
AA seq
DB search
MCVVIQTIPSTALCDRQPPLIQMILPLIFLLASLLQQYGSEAESSHVSKFNTPSVKEQNG
VQDSHQEKIITVSGEGMVHSPDFPNTYPRSTVLVWRLVATTNMRIQLTFDEKFGLEDPED
GICKYDFVEIEDLTENTILGRWCGSQSAPASHTSKGNQIRIRFISDEYFPSEPGFCIHYS
LLPVSVSEPEVPAVLPQSQQGIEELSDAVAGLSTVEEVMKYLEPERWQLDMEELYKPTWH
VLGKSFIHNKKARGGADLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRC
GGNCACCSHRCYDCQCVPARVTKKYHEVLLLKHRSGVKGLQKSMTDVPLEHHEECACVCK
DDWD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggtgatacaaaccatcccgtctacagcgctttgtgatcgccaaccaccactc
atccaaatgatccttccattaatattccttcttgcatcgcttctccaacaatatggctcg
gaagctgaatcaagtcatgtcagcaaatttaacactccaagcgtgaaggagcaaaacgga
gttcaagattcccatcaggagaagatcataacagtgtctggagagggaatggtccacagc
ccagacttcccaaacacttatcccaggagcaccgtgttggtctggagactagtggcgacc
actaacatgagaatccagctcacctttgatgagaagtttggtctggaggaccctgaagac
ggaatatgcaagtacgactttgtggagatagaggatctgactgagaacaccatcctgggt
cgctggtgtgggtcacagtcggcaccagccagtcacacttccaaaggcaatcagatcagg
atccgcttcatctctgatgagtacttcccctctgagccagggttctgcatccactactcc
cttcttcctgtgagtgtctcagaacccgaagtccctgcagttcttcctcagtcccagcaa
ggtattgaggagttgtcagatgctgtggcggggctgagcaccgtggaggaggtcatgaag
tacctggagccggagcgatggcagctggatatggaggagttgtacaaacctacatggcat
gtgctggggaaatccttcatccataataagaaggccagaggaggagccgatctcaatctg
ttgagggaggaagttcgactgtacagctgcacaccacgcaacttctctgtatccttgcgt
gaggagctgaagaggacagatgctattttctggccaagctgcctcctggtgaagcgctgt
ggcggaaactgcgcctgctgctctcaccgctgctacgactgccagtgtgttcccgccagg
gtcacgaagaaataccatgaggttctgctgttgaaacaccgaagtggtgtcaaaggcctg
cagaagtccatgactgatgtgcccttggagcaccatgaggaatgtgcctgtgtgtgtaaa
gatgactgggactga
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