Epinephelus lanceolatus (giant grouper): 117262068
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Entry
117262068 CDS
T07331
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117262068 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117262068 (cnot1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117262068 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117262068 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
117262068
NCBI-ProteinID:
XP_033490605
LinkDB
All DBs
Position
11:11604823..11631774
Genome browser
AA seq
2388 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFIATLCYAIDNPLHYQKSLKPSAHLFTQLSKVLK
LSKVQEVIFGLALLNSSNADLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LQLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASLDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHTWNVEVLIDVVKEVNPNLNFKEVTYE
LDHPGFIIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFS
FADYPCHTVAIDILKAPPEDDNREIATWKSLELVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISPSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDSLSGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGTGIGSGIGSSLGMSTVNTDPFGTRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKE
IDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFP
QYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYYFGIAALDRFKN
RLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQV
QAQSQQPGVPKAPQPGQPSTLVTTTTTTTTVAKTPTITRPTPSSFKKDVPPSINTTNIDT
LLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMK
RVSIEPNFHSLYSNFLDTLKNPEFVKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGH
WLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRPQNP
WTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGSLLKDKEKLKSLEEQLS
APKKEAKPPEEMLPVSTTGDFVPFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVYALAG
LAPHININVNIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKDFA
LDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPTPQQREMME
EAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQ
AERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATDDV
AQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAVEG
LLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVEAV
ELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLFHTI
ETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGL
REKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVE
ISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLG
IVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRP
TKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPM
QILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTP
NLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGN
RYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLN
AIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactaccgagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaggcagacaggcatctactacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaactttatcgctactctgtgctacgccattgacaatcccctgcac
taccagaagagtttgaagccatcggcccacctgttcactcaactgagtaaagttctcaag
ctcagcaaggtccaagaggtgatatttggacttgctttgctcaactccagcaacgcagac
cttcgtggttttgctgcgcagttcatcaagcagaaacttccggaccttctgcggtcatac
gttgacgcggatctcggaggaaaccaggaaggtggcttccaagacattgccatagaggtc
ttgcaactactgctctcccatctactgtttggccagaagggagccagtggggtagggcaa
gagcagattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggatccta
ccagactcgggggagttagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaagttggctatggcttctgtgctagtctggatgagtgcagaaacataatcattcagtat
ggggtgagagaggtgactgccagccaggtagccagggtccttggcatgatggctcgtacc
cactctggccttactgatggcatcccacttcagtccatctcagctccaggaagtggtatc
tggagcgatggtaaggataagaacgatggctcgcaggcacacacttggaacgttgaggtt
ctcatcgatgtcgtgaaagaagtgaatcccaacctgaacttcaaagaggtgacatacgaa
ctggaccacccaggatttataatccgggacagtaaaggcctgcacatagtggtgtatggc
attcagagggggttgggcatggaggtcttccctgtcgatctcatctatcggccatggaaa
catgcagagggacagctgtcattcattcagcactccctgatgagcccagaagtgttttcc
tttgctgactacccttgccacaccgtggctattgacatccttaaagccccaccagaggat
gacaacagggagattgccacctggaaaagtctggaactggtggagagtctgctcagactg
tctgaggtgggccagtatgagcaggtgaagcagctatttagctttccaatcaagcactgc
ccagacatgttggtcctggcattgctgcagatctccccctcctggcacacactgcgccat
gagctcatctctactctcatgcccatcttcctgggcaaccacccgaactctgccattatc
ctgcactatgcctggcatggacagggacagtctccctccatccgtcaactaataatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaagctaagctgtctcgcatc
ctggatgtggcacaggacttgaagtctctatcgatgttgctgaatggtactccctttgcc
tttgttattgaccttgctgcacttgcctctcgccgtgaatacctcaaacttgataaatgg
ctaactgacaaaatcagagagcatggggaaccttttatccaggcctgtgtgacattcctg
aagagacgctgcccatccattatggggggtctggccccagacaaggaccagcccaaaagt
gcccagctacccccggagaccttagccaccatgctggcctgcctgcagtcctgtgcaggg
agcgtgtcgcaggagctgtcagagactatcctgaccatggttgccaactgcagcaatgtg
atgaataaagcccggcaaccaccaccaggggtaatgccaaagggacgtgcccccagcacc
agcagcctggatgccatctctcctgtacagatggactctctgtctggcatgggttccttg
aacctggggggcacagccacctcccatactcaaagcatgcagggtttcccaacctcactg
agttcagctttcagtaatccccagtccccagcaaaggccttcccaccactgtccaacccc
aaccccagcacaccatttggtggcataggcagcctgtcctcgcagcttcccggtatggac
tctggtcctctgggcacgggcattggctccggtattggctctagtctgggtatgtcaacc
gtgaacaccgacccttttggcaccaggaagatgagcacaccaggcctgaacccaccaacc
tttcagcagactgacctttctcaggtgtggcccgaggcaaaccagcactttagtaaggag
atcgatgatgaagcaaacagttatttccagcgcatctacaaccacccacctcacccaact
atgtctgtggatgaagtactggaaatgctgcagagattcaaggattcaaccatcaagcgg
gagcgagaggtgttcaattgcatgctacggaacttgtttgaggaataccgattcttcccc
cagtacccagacaaggagctgcacatcactgcctgcctttttggtggcattattgagaag
ggtcttgtcacctacatggccctgggcttggccctccgatatgttcttgaagccttaaga
aaaccctatggatccaaaatgtattattttggaattgccgccctagataggtttaaaaac
agactaaaggactatcctcaatattgtcagcacctggcttcaattgcacacttcttgcaa
ttcccccaccatttacaagagtgcgtgcagtatatcgagtatggccaacagtcacgggac
cctccggtgaagatgcaaggctccatcaccacacctggcagtctggcacttgcacaagtc
caagcccagtcgcagcaacctggcgtccctaaagccccacagccaggtcagcccagcact
ctagtcaccaccaccacgactacaaccacagtagccaagacccctaccatcacaagacca
acacccagcagcttcaagaaggatgtgcctccctccataaacacaaccaacattgacacc
ctgctggtggccactgaccaaacagaaaggattgtagagcctccagagaatgttcaggag
aagattgcttttatcttcaacaacctttctcaatccaacatgacccaaaaggttgaggag
ttgaaagagacggtgaaggaagagttcatgccctgggtgtcgcagtacctggtgatgaaa
cgtgtcagcattgagcccaacttccacagtctctattccaactttctggacactctcaag
aacccggagttcgtgaagatggtcctcaatgagacttacaggaatatcaaggttctgttg
acctctgacaaggcagctgccaatttctctgatcgctccctgctgaagaacttgggccac
tggttgggcatgattacactggccaaaaacaagcctatcctttacacggatctggaagtc
aagtctctgctactggaagcctatgtgaagggccagcaggagctactatatgtggttccc
tttgtggcaaaggttttagagtccagtctacgaagcatggtcttcaggccccagaacccc
tggaccatggccatcatgaatgttctcgctgagctgcatcaagaacatgacctcaagctg
aacttaaagtttgaaattgaagttctgtgtaagaacttgtctttggacatcaatgacctc
aagccaggaagcttgctaaaggacaaagagaagctaaagagcctggaggagcagctgtct
gcaccaaagaaagaggcgaagcctccagaggagatgctgccagtttctaccacaggagac
tttgttccatttgcagcccctccctcaaccccagctgccaccaccaccacttgcacaacc
accgggccccccaccccacagttcagttaccacgatatcaatgtgtatgccttggcaggc
ctggctccacacatcaatatcaatgttaatatcccattgctacaggcccatcctcagttg
aagcagtgtgtacggcagtcagtagagcgagctgttcaggagctggtgcaccctgtggtt
gaccgctctatcaaaatagccatgacgacctgtgagcagatcatcaggaaggactttgcc
ctggattcagaggagtcccgcatgcgtgtggctgcccaccatatgatgagaaacctaact
gctggcatggccatgatcacctgccgcgagcccctgctcatgagcattgccaccaacctt
aagaacagctttgctgctgcactaagggcaccaaccccccaacagagggaaatgatggaa
gaggctgctgcaaggattgcacaagacaactgtgaactggcttgctgtttcattcagaaa
acggccgtggaaaaggctggccctgaaatggacaagagactagccacggagtttgagctg
aggaaacatgcacgccaagagggtcgtcggtactgtgatcctgttgttctgacttaccag
gctgaacgaatgccagagcagatcagactcaaggtgggaggagtggacccaaagcaactg
gctgtatatgaggagtttgccaggaacgttccaggtttcttacccagtaatgatctctcc
cagcccactggctttttggctcagcccatgaagcaacaggcatgggccacagatgatgtg
gctcagatctacgataagtgcatggcagacttggagcaacatcttcatgccatccctcca
gcccttgccatgaaccccttgacccaggctctacgcagcctgctggaagctgtggccttg
gctaggaattccagggacggcatcgcagcacttggccttctgcagaaggctgtggaaggt
cttctggatgctactagtggagctgatgctgacttgctgctacgctacagggagtgccac
ctgctggtgcttaaagccctacaggatggacgtgcctatggaccacagtggtgcaataaa
cagatcaccaggtgtctgattgaatgccgtgacgagtacaaatacaacgtagaagcagtg
gagcttctgatcaggaaccatcttgtgaatatgcagcagtatgacctgcacctggcacag
tcaatggaaaacggactgcactacatggcggttgcattcgccatgcagttggtgaagctc
ctgctagtggatgaacgcagtgtcagccatgtcacagaggctgacctcttccacacaatt
gagactttgatgaggacctgtgcacactccagagccaacgcacctgaaggccttccccag
ctaatggatgttgttcgctccaactatgaggccatgattgacagggcccatggaggaccc
aacttcatgatgcactctgggatttcacaggcttcagaatatgatgatcctccaggcctg
agggagaaggcagagtacctcctgagggaatgggtcaacctgtaccactcagctgcagct
ggcagggatagcaccaaagctttctctgcttttgttggccagatgcaccagcagggcatc
ctgaagacagatgacctgatcacaaggttcttccggctgtgcacagaaatgtgtgtggag
ataagctatcgggcacaggctgagcagcagcacaacccagcagccagtgcagccatcatc
agagccaagtgttaccacaacctggatgcctttgtgaggctcatagccctgctggttaaa
cactctggagaggccaccaacacggtgacaaaaatcaacctcctaaacaaggtgctcggt
attgtagttggggtgctaatccaggaccacgatgtccgtcagacagaattccagcagcta
ccataccaccgcattttcatcatgctgctgttggagctcaacgctccagaacatgtcctg
gagaccatcaacttccagacactcactgctttctgcaataccttccacatcctgagacct
accaaagcaccaggctttgtgtacgcctggctggaactcatctcccatcgcatcttcatt
gccaggatgttagcacacacaccccagcagaagggttggcccatgtatgcacagctgctg
attgatctattcaagtacctggccccattcctgaggaatgtagagctcaacaaacctatg
caaatcctctacaagggcacactgcgagtgctcctggtcctgctgcatgacttcccagag
ttcctgtgtgactaccattatggtttctgcgatgttatcccacccaactgcatccagctc
cgcaacctcatcctcagtgcctttccacgcaacatgaggctccctgaccctttcacaccc
aatctcaaggtggacatgctgagcgagatcaacatcgcgccccgtattctcaccaacttc
acaggcgtaatgccttcccagttcaagaaggatctggactcatatctgaagactcgttca
ccagtcactttcttgtctgagcttcgcagcaacctgcaggtgtccaacgagccaggaaac
cgctacaacatccagctgatcaatgctctagtgttgtatgtaggcacacaggcaatcgct
cacatccacaacaagggcagcaccccctctatgagcactatcacccactctgcacatatg
gacatcttccagaacctggctgtggacctggacactgaggggcgatacctgttcttgaac
gcgattgccaatcagctgcgctaccccaacagccacactcactacttcagctgcaccatg
ctgtatctgtttgctgaggccaacacagaggccatccaggagcagatcaccagggttctg
ttggagaggctgattgtgaacaggccccacccatggggtctcctcatcaccttcattgag
ctgatcaagaatcctgccttcaagttctggagccacgactttgtgcactgtgcccctgag
attgaaaagctgttccagtcagtagcccagtgctgcatggggcagaaacaggcccagcag
gtgatggagggcaccggtgccagctag
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integrated database retrieval system
