Epinephelus lanceolatus (giant grouper): 117262597
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Entry
117262597 CDS
T07331
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117262597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117262597
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117262597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117262597
NCBI-ProteinID:
XP_033491504
LinkDB
All DBs
Position
11:16344102..16369321
Genome browser
AA seq
1611 aa
AA seq
DB search
MFNWVVKVVPQLPEAPGTDDAAKTSAQPTGKSSQKNTDENSEDSQAQTGVLGWLSNGFVS
ALPQPSGSPRLGSDSRPGEDGERSKVMGWVAQGLTKVLPQPDEKYKETNDEEEHTEVYEV
ATMPDFDPLPHIPVVEILSEDEEEVEPATQFPPNMVNWIKQMVPQPVILPPGAVPIEPSN
KSNRSSLDKIFSPPPESLSGISLDTDSKASGVVGWFVSGLGLKLPQPVVPPKDETENAAQ
VLQKASFKLKPDMVLEDVDSDNESQQKQLQSKAVAPSTSLTPPSPTVSQKQELTQQAQSN
AMETQTCASPEPEPSQSGTKSLEDAETQTGRWTPFIENIKKEAEGVALATMEERLLQERM
EMARMAEEVARQTAEMAIRQMASEGQSIKLSLGSQELLDEEPEIELPVPQEEESEVDQNN
VTGKEQSAAEETEEPITTEPEPKEEAEPQRTSPSPPPSPEPVKTSEPEHEAEPEQEPEPE
AEQEPESETEAEPAAKTEEANSEAEPVTQQPQKAQEDGQSTKAEKAGEKEEEAAGDECGA
PVNCDAFKSCLMRIPHTSECLGNINAFFKENGISTPKIPSMPKLPTQLSDVTKYLPSLPS
LPPELRQELSQIRLTQVPRNIAQTLTELLPKNSEGSVSPSLSSLSQSFSNIPQKLSQFPS
RTQQYFLNVQNRLNSLMPQDAXETTQQQKQKQDKNQQDVELNRLVRHSPLPPPQLRSRSP
SPSSPNGSTLELPNVPSYPRLPPIVSPPSKQLNSLSRQLSGLSNPAFFIEDDSDIPAIRP
AESSSLSLHPAVNVEDVDSDHERGSKGGAGGGGGGGGGEEQSKIPQILTPQDPKLTTLTV
PVTPSGGRQSKGDKDSGRNRRTVWTKIRRLPSQSEDDDDEGSIPVRAWPSQSSLHSSDDI
LKERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSIIPSPPQAPAPQ
PAPAAQPVDGGEKEAQAGPSGGGGEGGVGVESEAEEEQSSRCCKVKTPRWMRACMHYRFP
ASIDPFTNLMYVLWMFLVSLAWNWNVWFIPVRWAFPYQTPDNIYYWLLIDYLCDLIYILD
ITIFQPRLQFVRGGDIVCDKKEMRKNYMKTKRFKFDVASLVPLELFYFKIGINPLLRLPR
LLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSAFTGLGSTKWVY
NGEGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMRDVVGA
ATAGQTYYRTCVDSTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMR
LDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAG
EVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNEI
LVHYPESKKLLRKKARKMLTKGKKPEPKEEAKHPPQAPAAPVRTETPRLLRAALEMTEKS
SGLKGALAKVKENTSKSSVSLQPSISSSLPPPSPTSSSGPERDVDTPPSPMCASSGAFRS
ASRCRNNNSVTPHSASQCHGNANEMPTVDQREEGVSEVEASEGGKRKEKKL
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccccaactccctgaagctcctgggacagatgac
gctgctaagacctctgctcaacccacagggaagagttcacagaaaaacacagacgagaat
tcagaggacagccaggcccaaactggagttttaggctggctgtctaatgggttcgtcagc
gccctgcctcaaccttctggctcccctcgactcggctctgattccaggccaggagaagat
ggagaaaggtctaaagtgatgggctgggtcgctcagggtctgaccaaggtgttgcctcag
cctgacgagaagtacaaagagactaacgacgaggaagaacacactgaggtctatgaagta
gcaacaatgccagattttgatcccctcccacacatccctgtggtggaaatcttgtcagag
gatgaggaggaggtagagccagccactcagtttcctcccaacatggtgaattggataaag
cagatggtccctcagccagtgatactgccccctggtgccgtacctatagaaccatcaaac
aagtccaaccgctcctccctggataaaattttttctccaccacctgaatctctcagtgga
atctcactggatactgacagcaaggcctctggtgtggttggctggttcgtgtcaggtctg
ggtctgaagctgcctcagcctgttgttccacctaaagatgaaactgagaatgcagctcaa
gttctacagaaagcttcattcaaactcaaacctgacatggtactagaagacgtggactca
gacaacgaaagccagcagaaacaactgcagtccaaagctgtagcaccatccacatcactg
accccaccatcaccaacagttagccaaaagcaggaactgacgcagcaggcgcagtccaat
gcaatggaaactcagacatgtgccagcccagagccagagccgtcacagagtgggacaaaa
agtctagaagatgctgagactcagacgggccgctggacgccattcattgaaaacatcaag
aaggaggcggaaggtgtggctttggctaccatggaggaacgtctgctgcaggagcgcatg
gagatggcccgtatggctgaagaggtggcaaggcagacagctgagatggccattagacag
atggccagtgagggacagtccatcaaactctcactggggagtcaagaactcctggatgag
gagcctgaaatcgagctgccagtgccacaggaagaggagagcgaagtggaccaaaataat
gtcacaggaaaagaacagagcgctgctgaggagactgaggaacctatcaccacagaacca
gagccaaaggaggaagcagagccacagcggacctccccctcgccacctccaagtcctgaa
ccagttaagacctctgagccggagcatgaggccgagcccgagcaggagcccgagcctgag
gccgagcaggagcctgaatcagaaacagaagcagaaccagcggcaaagaccgaggaagcc
aactcagaagctgagcctgtgactcagcaaccgcagaaagcacaggaagacggtcaaagc
accaaagctgaaaaagctggtgaaaaggaggaggaagctgctggagatgaatgtggtgct
ccagtcaactgtgatgcatttaagagctgcctgatgcgcattccccacacctctgagtgc
cttggcaacatcaacgcgttcttcaaggagaacggcatctccactcccaaaataccctcc
atgcctaagctacccacccagctctctgatgtgaccaagtacctgccctctctaccctct
ttaccccctgagttgcgccaggagctctcccagatccgactcacgcaggtcccacgaaat
atcgcccagactctgactgaacttttgcccaaaaactctgagggttcagtcagtcccagt
ctgtccagtctctcccagagcttttcaaacatcccgcagaagctctcccagttccccagc
cgaacgcagcagtacttcctcaacgtccagaaccgcctcaacagccttatgcctcaagat
gcctaagaaacaacacagcagcaaaaacagaagcaagacaagaatcagcaagatgtcgag
ctgaaccggctcgtccgacattctcctctccctccacctcagctccggtcccgctccccg
tctccatcctcccccaacggtagcaccctcgaattgcccaatgtgccatcctacccacgc
ctgccgccaattgtcagccctccatcaaaacagctcaactcactgtcccgccagctgtca
ggtctctctaacccagcgttcttcattgaagacgactcagacattccagcaataagaccc
gcagagagctctagcctcagcctccatccagctgtcaatgtagaggatgttgactcagac
catgagagaggaagtaaaggaggagcaggaggaggaggaggaggaggaggaggggaggaa
cagagcaaaatcccccaaatcctcaccccccaggatcccaaacttacaaccctcactgtc
cctgtgaccccctctggaggtcgtcaaagtaaaggagataaagatagtggaaggaatcgt
aggactgtctggacaaagattaggaggcttccatctcaaagtgaagatgatgatgatgaa
ggaagtatccctgtcagagcctggcccagccagtccagcctgcacagctcagatgacata
ctgaaagagcgaccagcgtcttcagccagtcagaccagtacagtggtcaatgagcgtctt
caggagctggtcaggatgttcaaagagagaacggagaaggcgaaggagaaactcattgac
cctgacagctcagatgaagacagcatcatcccctctcctcctcaggctccagctcctcag
cctgctcctgcagctcagccagtggacggaggggagaaggaggcacaagcaggtccatca
ggaggaggaggagaaggaggagtgggagtggagagtgaggcagaggaggagcagtctagc
cgctgctgcaaggtgaaaactcctcggtggatgcgagcttgtatgcactaccgcttcccc
gccagcatcgaccctttcaccaacttaatgtacgtgctgtggatgtttttggtctctctg
gcgtggaactggaacgtatggttcatcccagtgcgctgggccttcccctaccagactcca
gacaacatttactactggctgctgattgactacttgtgtgaccttatttacatcctggac
atcaccatcttccagccgcgcctgcagtttgttcgtggaggggacatagtgtgtgacaaa
aaagaaatgagaaagaattacatgaaaaccaaacgcttcaaatttgatgtagccagcctt
gttcccctcgagctcttctatttcaaaattggcatcaaccctctgcttcgcttacccagg
ctgctgaagatcaactccttctttgagttcaatgagcgtttagaggccatcttgaccaaa
gcctacatctacagggtgatccgcaccaccacctaccttctttactgtctccactgtaat
gcctgtctgtactactggggctctgcattcacaggactgggatcaactaagtgggtgtac
aatggagagggcaacagttacatacgctgttactactttgcggtgaagaccctgatcacc
attggtggtctgccagaccccaccactctgttcgagattgtcttccaactcatcaactac
tttgttggagtctttgccttctctatcatgattggacagatgcgtgatgtggtcggtgca
gccacagcgggtcagacctactaccgcacatgtgtggacagcactattaaatacatgtcc
tcctatcgcatccccaaagacgtgcagaaccgtgtcaaaacctggtacaactacacctgg
caatcacaaggcatgctggatgagcaggagctgctgactcagttgccagataaaatgcgt
ctggacattgctattgatgtcaactattccattgtcagcaaagttcctctttttcagggt
tgcgacagacagatgatctttgacatgttgaaaagcctacgctctgttgtctacctgcct
ggggattatgtctgcaaaaagggcgaagtgggccgggagatgtacatcataaaggcaggg
gaggtgcaggtggttggaggaccagatgggaagacagtgtttgtcactctaagagcagga
tcggtctttggagagatcagtttgctcgcagtaggtgggggtaacagacgcacagcgaat
gtaatcgcccatgggtttgctaatctcttcatcctggacaagaaggacctgaatgagatc
ttggtccactaccccgagtccaagaaactgctccggaagaaagccaggaagatgcttacc
aagggaaagaaacctgagcccaaagaggaggctaagcatccccctcaggccccggcggcc
cctgtacggacggaaacccccagactgctgagagcagccctggagatgacagagaaatcc
tctggacttaaaggagctctggctaaagtcaaagagaacaccagcaagtctagtgtctca
ttacagccctccatctcttcctccctgcctcctccgtctcccacctccagctcaggacct
gagagagacgtggacacaccaccgtcacccatgtgtgccagctctggagcattccgctct
gcctctcgttgccgcaacaacaactcagtgacgcctcactctgcgtcacagtgtcatggc
aacgcaaacgaaatgcccaccgtggaccaaagagaggagggcgtcagtgaggttgaagcg
agcgagggtgggaagaggaaagaaaagaagctgtga
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