Eleginops maclovinus (Patagonian blennie): 134858382
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Entry
134858382 CDS
T09869
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134858382 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134858382 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134858382 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
emac00535
]
134858382 (col9a1b)
Proteoglycans [BR:
emac00535
]
Extracellular matrix (ECM) proteoglycans
Others
134858382 (col9a1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134858382
NCBI-ProteinID:
XP_063730306
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Position
22:12075002..12088186
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AA seq
674 aa
AA seq
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MAQAPSVRGPLLVLVLQLVLICSAQRSQGPAGPAGVPGIDGISGARGEDGAEGPPGPDGD
AGKPGSTGLPGLPGNDGLTGPIGDAGPDGPLGQKGEPGKSGPRGATGVGPDGPPGPPGPG
GLLGEVGRVGPLGSIGVRGPQGPRGTTGPRGAAGMQGSSDLCPNSCPPGTSGHPGLPGMK
GHKGVKGEAGEPGKQGHKGEEGDQGGSGELGSQGPTGPQGIRGAMGMMGHKGELGARGLG
GDPGPQGVAGATGDRGQRGVMGELGPKGETGVLGPRGITGVPGPKGDGGLPGVDGREGIP
GMPGAKGVIGKSGVPGEVGLQGLPGLPGSTGPKGLTGSKGDVGQAGIPGTMGPAGKAGER
GEQGGLGPIGPIGEPGAVGVQGPVGSAGKPGARGSKGDPGLLGLPGPHGLPGVKGDRGDR
GEPGPKGEQGGQGDEGNPGDKGELGEAGEGGAKGETGNIGDAGKRGPEGSRGQPGIEGPP
GTPGPRGMQGNRGPPGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESGVV
GLPGKPGPPGPPGSQGDNGFPGQGGTRGLPGLKGPQGMLGVKGPKGELGDRGSRGPTARG
PKGQPGPPGLPGEPGKPGYGQDGRDGQRGPPGIHGQPGVPGPPGSAGPNGYCDPSACNLQ
PGAQLVDTKGPAGN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaccgagcgttagagggccacttttggttctggttctacagcttgttctt
atctgctccgctcaaaggagccaaggacctgctgggcctgcaggtgtaccaggaattgat
ggcatttctggggccaggggagaagatggcgcggaaggacctcctggacctgatggagat
gcaggcaaacccggctctacaggattacctggacttcctggaaatgatggtttgaccggc
cctattggagacgcagggcccgatggtcccctcggacagaaaggtgagcctggaaaatct
ggacctcgtggagccactggtgttgggccagatggaccacccggaccacctgggcctgga
ggacttttgggtgaagtgggaagggttggaccacttgggtccataggtgtgagagggcca
cagggacctcgtggaacaacagggcccagaggtgcagctggaatgcaaggcagttctgac
ctgtgtccaaactcttgtccgcctgggacctctggacatccaggcctccctggcatgaag
ggccataaaggtgtaaaaggtgaagcaggagaacctgggaaacaagggcacaagggtgag
gagggagaccagggtggttcaggggagctcggatcccaaggaccaacgggtcctcaggga
attcgtggagccatgggaatgatgggccacaagggagagttgggagctcgaggtcttggt
ggagatccaggtccccagggtgttgcaggggcaactggggatcgaggccagagaggtgtg
atgggcgagcttgggcctaaaggtgaaactggtgttctagggccgagaggaatcacaggt
gttcccggtccaaagggagacggtggtttgcccggtgtggatggccgcgagggtattcct
gggatgcccggagcaaagggagtcattgggaagtcaggcgttcctggagaggttggactt
caggggcttcctggtttgcctggttcaactggaccaaaaggcttgactggctctaaggga
gacgttggtcaggcaggcatcccgggaacaatgggacctgctggcaaagcaggtgagcgt
ggagaacagggggggctgggacctattgggcctattggagaacctggagctgtaggtgtg
caagggcctgtaggttcagcaggcaagccaggtgccaggggatccaaaggtgaccccggc
ctccttggtcttcctggtcctcatggactgcccggtgtgaagggagacaggggagaccgt
ggagagccaggacccaaaggagagcagggaggtcaaggtgatgagggaaaccctggagac
aaaggggagctcggtgaggctggagaaggtggagctaaaggagagaccggtaacataggc
gatgctggcaaaagaggaccagagggaagccgaggacagccaggcatcgaagggccacct
ggcacacctggaccacggggcatgcaggggaacagaggcccacctggagttagggggtcc
cagggtcctgcgggtaaagagccaagcgatcagcacatcaaacaagtttgcatgcgcgtc
atgcaagaacagctggcacagttagccgctagcttaagaaggccagagtcgggcgttgtt
ggtctacctggaaaacctggtcctccagggccccctgggtctcaaggagacaacggcttc
ccggggcagggcggaacaagaggccttccaggactcaaagggccacaaggaatgcttgga
gttaaaggacccaaaggtgaattgggagacagaggctccagagggcccactgctcgagga
cctaaaggtcagccaggacctcccggactccctggtgagcccggcaaacccggctacggt
caggacggtcgggacgggcagcgaggacctcctggtattcacggacagcccggcgttcct
ggtcctcccggttcagctggtcctaacggatactgcgacccatcagcctgcaacctccag
ccaggagcccagcttgtggatacgaagggccccgcaggaaactaa
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