KEGG   Eleginops maclovinus (Patagonian blennie): 134862620
Entry
134862620         CDS       T09869                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Pathway
emac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:emac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134862620 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emac03400]
    134862620 (tdp1)
DNA repair and recombination proteins [BR:emac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     134862620 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 134862620
NCBI-ProteinID: XP_063736695
LinkDB
Position
4:28747611..28756489
AA seq 603 aa
MSQDSHHGKWTISSSDDDDDLPLSGTTKSSTTIPKIEEATVEVKPEPANTPVSSLVIGSE
ARQSAAANQVNPLKYESSPSLAGKRKKEVSDGSGWTLSDSEDDDGDEKGKSLGNSPKRAP
PSPKTKKVKVETERPPSPHGRLYYIDEPEDFFESSIPCLNDPYRFYLNKVTGLDRKYNSG
ALHIKDILSPLFGTLKESVQFNYCFDIAWMVDQYPSEFRDRPVLVVHGDKREAKARLLQQ
AKPFPHVRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIITTSNLIRADWYQKSQGMWMSPL
FPRLPNGSSDDEGESPTFFKRDLLEYLASYRAPELEEWIQRIREHDLSETRVYLVGSTPG
RYVGPDMERWGHLRLRKLLYEHTEPIPGEESWPVIGQFSSIGSLGLDKTKWLTGEFQRTM
TTLGKSSVRSAPPLQLVYPSVEDVRTSLEGYPAGGSLPYSIQTAQKQLWLHSFFHRWKAN
ATGRSHAMPHIKTYMRASPDYTQLAWFFVTSANLSKAAWGALEKNNTQVMVRSYELGVLY
VPSAFNMKTFPVSGNPFPVSSSSGFTVPFDLPPTCYCLKDQPWIWNIPYNQAPDTHGNIW
VPS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtctcaggacagtcaccatggcaagtggaccatctccagcagtgatgacgatgatgat
cttcctctttcggggacgaccaaatcatctaccaccatcccaaaaatagaagaagccact
gtagaggtgaaaccagaaccagctaacacccctgtatcctcacttgtgattggctctgag
gccagacagtcagcagcagcgaaccaggtaaatccactgaagtatgaaagtagtccttcg
ttggctggaaaaaggaaaaaagaggtgtcagacggctcaggctggactctctcggatagt
gaggatgatgatggagacgagaaggggaagagtcttggtaactccccaaagagggcgcct
ccaagccccaaaacaaagaaggtgaaggtggagactgagcggcccccaagtccccacggc
cgcctctactatatcgacgagccagaggacttctttgagtccagtattccttgtctgaat
gacccctacaggttttacctcaacaaagtgacaggcctggacaggaagtacaacagtgga
gctctgcacatcaaagacattctctctccactctttgggaccctgaaagagtcggttcag
tttaactactgctttgatattgcctggatggttgatcagtacccatcagagtttagggat
cgtccagttctggtcgttcacggagataaaagagaggccaaggctcggctgctgcagcaa
gccaagccttttccacatgttcgcttctgccaggccaagctggatattgcttttggaacg
caccacacgaaaatgatgttgctgtggtatgaggaaggcttcagagtcattataacgacc
tccaacctcatcagggctgactggtaccagaaatcacaagggatgtggatgagccccctg
tttccacggttaccaaatggcagtagtgacgacgaaggtgagtctccaaccttctttaag
agggacctgctggaatacctggcatcgtaccgcgcaccggaactggaggagtggatccaa
cgaatcagagagcacgacctgtcagagaccagggtttatttggtcggctcaaccccaggg
agatatgtcggccctgacatggagcgctggggccacctcaggctgaggaagctgttgtat
gagcacacagaaccgattcccggggaagaaagctggcctgtgattggccagttctccagc
atcggctctttaggactggataagaccaaatggttgacaggggaatttcagcgcaccatg
accacgctgggaaaatcctcagttcgctcagcccccccactgcaattggtgtatccatca
gttgaagatgtgaggacaagtttagaaggctatccagccggaggctctctaccctacagc
atccagacagctcagaaacaactctggctccactccttcttccaccgttggaaggcaaat
gcgacaggaaggagtcatgccatgccacacatcaagacatacatgagggcgtcacccgac
tacactcagcttgcctggttcttcgtcacaagtgccaacctgtccaaagcagcatggggt
gcgctggagaagaacaacactcaggtgatggtccgctcatacgagctcggagtcctctat
gtgccgtctgcctttaacatgaagaccttccctgttagcggaaatccatttcctgtctcc
tcttcctctggtttcactgtgccatttgacctcccccccacatgctactgtctcaaagat
cagccttggatctggaacattccgtacaaccaggctcccgacacacacggcaacatctgg
gttccctcctga

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