Eleginops maclovinus (Patagonian blennie): 134868468
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Entry
134868468 CDS
T09869
Symbol
tnpo1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134868468 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134868468 (tnpo1)
03009 Ribosome biogenesis [BR:
emac03009
]
134868468 (tnpo1)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134868468 (tnpo1)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134868468 (tnpo1)
Pre-60S particles
134868468 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
TOR1L1_N
Vac14_Fab1_bd
IBN_N
TPR_IPO5
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
CEP104-like_TOG
UNC45-central
Dopey_N
VPS15-like_hel
RTP1_C1
HEAT_DAAF5
RXT2_N
Motif
Other DBs
NCBI-GeneID:
134868468
NCBI-ProteinID:
XP_063745682
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All DBs
Position
8:18952872..18976358
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AA seq
891 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKNECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPQLCQLLDSEDYNTCEGAFGALQKICEDSAEILDSDILDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMLNIIEYMLLRTQDQDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEEDGIEDDDDE
DDELDDDDDTISDWNLRKCSAAALDVLANVFRDDLLLPILPLLKELLFHPEWVVKESGIL
VLGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLK
PLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLL
ILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQS
GFLPYCEPVYQRCVNLVQKTLAQAMLYQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTI
EELVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP
ELISVCNNATWAIGEISIQMGSEMQPYISMVLHQLVEIINRPNTPKTLLENTAITIGRLG
YVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAV
ASWVNPKDDLRDMFYKILHGFKNQVGEDNWTRFSDQFPLPLKERLATFYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaaggacttcaacaaattttacagctgctgaaa
gagtcccagtcgccagatacttccacacagagatccgtccagcaaagactcgagcagctg
aaccagtatccagattttaacaactatttgatatttgtgctgacaaagttaaaatcagaa
gatgaaccaacgcggtccctgagtgggctgatactgaagaacaatgtgaaagcccactat
cagaacttccctaatggcgtgtctgatttcatcaagaacgagtgcctccaaaacatcgga
gactcctctcctctcatccgggccaccgtgggtatcctcatcaccaccatcgcctcaaag
ggagagctacaaaactggccggagcttttacctcaactctgccagctgctggattctgag
gactacaacacatgtgagggtgcgtttggagccctacagaagatctgtgaggactccgct
gagattttggacagtgacattctggatcgtcctctcaacatcatgatccccaagttcttg
cagtttttcaagcacagcagtcctaagattaggtctcatgccattgcctgcgtgaatcag
ttcatcatcagccggactcaggctctcatgctgcacatcgaccctttcattgagaacctg
tttgctctggcgacagatgaggaacccgaggtgaggaagaatgtgtgcagagctttagtc
atgctgctggaggttcgtctggaccgcctcctgccacacatgctcaacatcatagagtac
atgctgctgaggactcaggaccaagatgaaaatgtggccttggaggcctgcgagttctgg
cttaccctggcagagcagcctgtgtgtaaggaagtgctctgtggacacctctctcagctc
actccggtgcttgtcaacgggatgaaatactctgagattgacataatcctgctcaagggg
gacatcgaggaagatgaggctattcccgacaacgagcaggacatcaggccgcgcttccat
cgctcccgcacagtcgcccagcagcacgaggaggacgggatcgaggacgacgatgatgag
gacgatgagttggatgatgatgacgataccatttctgattggaacctgcgcaagtgttcg
gctgcagcgttggacgtgctggccaacgtgttcagggacgatctgctgctgcccatcctg
cccctcctcaaagagctgctcttccatccagagtgggtggttaaagagtctggcatccta
gtgctgggtgctatagctgaaggctgtatgcagggaatgatcccgtacctgcctgagctc
attccccatcttgtccagtgtttgtctgacaagaaggccctggtgcgatccatcacctgc
tggacactgagccgctacgcccactgggttgtcagccagcccccagatacttacctgaaa
cccctaatgacggagctgctcaaacgcattctggatagcaacaagcgtgtgcaggaggct
gcttgcagtgcctttgccactctggaggaagaggcttgcacagagctggttccctacctg
gcgttcatcctggacacactggtgttcgctttcagcaagtaccagcacaaaaatctgctc
attctttatgacgccataggaactcttgcagactcagtggggcaccatctcaataaaccg
gaatacatccagatgttgatgcctccactgatccagaaatggaaccagctgaaagatgaa
gacaaagatctcttccctttattagaatgtctgtcgtctgtagccactgccctgcagagc
ggcttcctgccctactgcgagcctgtgtaccaacgctgtgtcaacctggtgcagaagacc
cttgcccaagccatgctttatcagtcacagccggaccagtacgaggctcctgacaaagac
ttcatgatcgtggctttggatctcctcagtggactggctgagggtttgggaggcaccatc
gaggagctggttgctcggagcaacatcctcacccttatgtaccagtgcatgcaggacaaa
atgccagaagtgcgtcagagttcttttgctctgctgggggatttaaccaaggcttgtttc
caacacgtcaaaccgtgcatcgctgattttatgcccatactgggtactaatttaaaccca
gaattaatatcagtgtgcaacaatgcaacatgggcaatcggagagatatctatacaaatg
ggctctgaaatgcagccgtacatttccatggtgctgcaccagctggtggagatcattaac
aggcccaacaccccaaagactctgctggagaacacagcaataacaattggtcgtcttggt
tacgtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacc
tctctgcgaaatataagggacaatgaggagaaagactctgcgttcagaggaatttgcact
atgatcagtgtaaacccaggcggtgtagtgcaggattttatattcttctgtgacgcagtg
gcctcctgggtaaatccaaaggacgatctcagagacatgttctacaagatccttcacggc
tttaagaaccaggtgggcgaggacaactggacacgcttctcagatcagttccccctgcct
ctgaaggaacgcctggcaacattttacggggtgtaa
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