Eleginops maclovinus (Patagonian blennie): 134868897
Help
Entry
134868897 CDS
T09869
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134868897 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134868897 (nup188)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134868897 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
134868897
NCBI-ProteinID:
XP_063746356
LinkDB
All DBs
Position
8:19722208..19742100
Genome browser
AA seq
1744 aa
AA seq
DB search
MAESEMSVRSSRELHTILLGRSALREPAQIEAELDRHWDRLHQGLCYYKPPSSSSAGKVK
EDKDVAQPLKDFGLRISKLLCLDEHQSVQLLQCYLQEDYRGTRDSLKVVFKDERQSQSLL
LKVADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSKYKSQFENLFK
AEAPTWETHGNLMTERQVSHWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTKMFKEQ
GFGLRQTNRHLVDKSMDALVDRIGYFSSLILVEGMDIDFLHKCALEDCTEQHQFSSAADV
IKGMDQLLLTFGDIPHHGPVLLAWVLLRHTLRPEESSPVIRRIGNTALQLEVFKYISTML
KGLGVSGNNVTAITAKMCIYGLLSFVVTSFEEESLQTGGQATQCSHLIDAACEVLSAPNL
AEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKMSYYTQ
VYKHKPNDIISKDDETLWRRQTPKLLYPLGTGQTNLWMPQGVLGQVMIGGEQGYVVRWDH
SYSSWTLFTCEVEMLLHVVSTADVISHCVRVKPILDLVHKFISTDWTVSDCLLPLTSRIY
MLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTIMAQCLS
AEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLVTTLVKGQLGSTQNKGLIPCVLLVLKEM
LPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLANTEAGQ
AVVNIMGVGVDTIDVVLAAQPSSSEGPGQILIQTVKLAFSVTNNVIRLKPPSDVVSPLEQ
ALTQHGGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRD
AFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGKEGSKEFLLGEWSCL
HVVLDLIDSKQQGRYWCPPMLHKAALAFLLALWQDRRDSAISVLRTKDRFWENLTTPLFA
TLTPPSDTTEACVLETCAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFANARRYEYWSQYV
KSLVCHVAEMEEEGVGSLAETQMLISAWRMLLILSTTHSDVMQLSEDSTKLKLFMDVLDG
TKAALTIPMSVPCLRLGSMMATLLLILLKQWRSVVATAPDILSPLSLILESVLQADQQMM
ERTKAKIFSALISVLQIQGLNGGDISQLPQLLLCVCETVKDEALALIDSTRHMSQMGEVL
EDEDSMETDSFRSPQKDQRDGVCVLALHLAKELCRSDEDGEHWVSVLRKVPVLPSVLSAV
EISLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGIIQTICLPLLSVYEGSSNGASQS
FSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTVQS
LACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDVQVNLCYLCQTCTYLLHSKKMLHHYL
QAKNGEALPPGPLPRTQRAPQTPSKEAAGGGEREEAEQKALLAVQCSLLKILSKTLATLQ
HFTPDCCQILLDQSMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVALSMLGEIEK
KKEPVSVSIASLASSEEIQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRDKQRLKQE
LSSELSTLLSSLSRHFRRGSPSSPASSMLPSTQNKPPTPGSKASHEGQEPFIQLVQAFVR
LVQR
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatccgagatgagcgtcaggagcagtcgagaattacataccatattgctggga
agatctgcattgcgagaaccagctcagatagaggcagagctggacagacactgggacagg
ctgcaccaaggtctatgttattacaaaccacccagctcgtcctctgctgggaaagtgaag
gaggataaagatgttgcacaacctttgaaggattttggtctgaggatcagtaaactattg
tgtcttgatgagcaccagagtgtgcagcttttacagtgctacctacaggaggactacaga
ggaactcgggattcgttaaaggttgttttcaaagatgagcgacaaagccagtcactgctg
ctgaaggtggctgactattattacgaggagcgcatgtgtctgctcagatgtgtcctactc
ttgctgacatactttcaggatgagcgacatccctacagagcggagtacagtaactgtgtc
aataaactggagaaggacctggtgagcaagtataagtcccagtttgaaaacctcttcaaa
gcagaagcaccaacatgggaaactcacggaaacctcatgacggagaggcaggtgtcccac
tggttcctgcagtgtctgagggaacagtctctgctgctggagatcatcttcctgtactat
gcatactttgagatgagcccgtccgacttgctgagcttcaccaaaatgttcaaagagcaa
ggcttcggtttgaggcagaccaacagacatcttgtagataaaagcatggacgccctggtg
gaccgcatcggatattttagctccctgatcctggtggaaggaatggacatagacttcctg
cacaagtgtgccctggaggactgcacagagcagcatcagttctccagcgctgcagacgtc
atcaaggggatggatcagctgctgttgacgttcggggacatccctcaccacgggccagtg
ctgctggcctgggttctgctgagacacacgctgcggccggaggagtccagccctgtcatc
aggaggatcggaaacaccgccctgcagctcgaagttttcaagtacatctcaaccatgctg
aagggcttgggtgtgtcagggaataatgtcacagcaatcacagcaaagatgtgtatctac
ggtctcctctcgtttgtggtcacttcttttgaggaggaaagcctacagactggtggtcag
gcgactcagtgctcccaccttatcgatgctgcctgtgaagtcctctccgctccaaatctg
gcagaagttttttgggaaatgaaaccgaacatgggattggggatgattctggacagtgca
gtcgggatgttccctcacaagattggacctctgttacagcttctaacggcacttctgtca
aacaagtccactgtgaaaaaggtatacaactttctggataagatgtcctactacacacaa
gtttacaaacataaaccaaatgacataatctccaaggatgatgagacgctgtggagaaga
caaacacccaaactgctctaccctctcggcacagggcagactaacctgtggatgcctcag
ggggttctgggtcaggtgatgatcgggggggagcagggctacgtggtgcgctgggatcac
tcctacagctcctggactctgttcacctgcgaggtggagatgctgctccatgttgtttca
actgcagatgtgatctcccactgtgtgcgtgtgaaacccatcctggatctggtgcataag
ttcatcagcacagactggacggtgtcggactgtctgctgcctctcacctcacgcatctac
atgctgctgcagaggttaacatcagtcatcaaccccccagtggatgtgatcgcctcatgt
gtgaactgcctctctgtgctggctgcgaggatgcctgggaaggtgtggtccagtctgcac
cacactggtttcctacccttcgcctccaaccctctgaccatcatggcccagtgtttaagt
gctgaagggatgaaggcagggaactacggcaacctgctggtccagattgagcaaccgagg
ggggagtacgctgtgaccatagccttcctgcgtcttgtcacaaccctggtcaagggtcag
ctgggcagcactcagaacaaaggtctgatcccctgtgtgctgctggtgctgaaggagatg
ctgcccacctaccacaagtggcgctacaacacctacggagtcagagagaggataggatgt
ctgattttggagctgatccatgccatcctcaatctgagtccagagggggaggatcagggc
agcacccccaccctgcagtctctgtgcatctacagcctggccaacactgaggctggacag
gcggtcgttaacatcatgggagtcggagtggacaccattgatgtggtgctggctgcacag
cccagcagctccgagggtcccgggcagatcctgatccagacggtcaaactggccttctcg
gtcaccaacaacgtcatccgcctgaagcctccgtctgacgtggtgtctcctctggagcag
gccctgacgcagcacggaggccacggcaacaacctcattgtggtgctggccaagtatatt
taccacaaacacgacccggcactgcctcgcctcgcaatccagctgctcaagaggctcgcc
acggtggctcccatgtcagtctacgcttgcctgggcaatgatgcagcggccatccgggat
gcattcctcactcggctacagagcaagacagaagacatgaggatcaaggtcatgatcctg
gagttcctcacggtggcggtggaaacgcagcctggcctcatcgagcttttcctcaacctg
gaagtcaaagatgggaaggaggggtcaaaggagtttctgcttggggagtggagctgcctc
cacgtggtgttggatctgatcgactccaaacagcaggggaggtattggtgcccccccatg
ctccacaaagcagcgctggccttcctgctcgccctttggcaggaccggagagatagtgcc
atctctgtcctacgcacaaaagacagattttgggaaaatttgacaacgcctctctttgca
accctcacccctccctcagataccacagaggcttgtgtcctggagacatgtgcctttgtc
atgaagatcatcggcctggagatctactatgttgtcagtgggtctttggagcagtccctg
aaggatgggctccagaagtttgccaacgcccggcggtatgagtactggtcccagtatgtg
aagtctctggtgtgccacgtggcggagatggaggaggagggtgtcggctccctcgctgag
acccagatgctgatctctgcctggaggatgctactcattctttccaccactcattccgat
gtgatgcaactctcagaggactcgaccaaactgaagctgttcatggacgtcctggacggg
accaaagcggctctgaccatcccgatgtctgtgccttgtcttcgtctcgggtccatgatg
gccactctgctgctcatcctgctcaaacagtggagaagtgtggtagctacagctcctgac
atcctgtctccactctccctgatcctggagagcgtcctgcaggccgaccagcagatgatg
gagagaaccaaagccaaaatcttctcggccctcatctccgtgctgcagattcagggactc
aacggtggagatatttcccagctgccccagctgctgctgtgtgtgtgtgagacggtgaaa
gatgaggcgctggcgctcatcgacagcacccgccacatgagccagatgggggaggtgttg
gaggacgaggacagcatggagacggactctttccgcagcccgcagaaggaccagagagac
ggggtgtgtgtgttagcgctgcacctggcgaaggagctgtgtcgcagcgatgaagatggt
gagcactgggtctctgtgctgaggaaggttcctgtccttccctcagtgctcagcgccgtg
gagatcagcctgcgatccaaacacaacctctacttcaccgaggctgccctgcacctgctg
ctcacactggcacgcacacctcagggggcagcagctgtagctggagcaggaatcatccag
accatctgcctccccctcctcagcgtctacgagggctcttcaaacggagcctcacagagt
ttctccaggaagtcgcaggactcggcctgctggccgggggtttaccgcctctgcatgtct
ctgatggagagtttgctcaagacactgcgctacaacttcattaacgaggccctggacttt
gtaggagtccatcaggaacgcattctacagtgtctgaacgcagtgcgcaccgtgcagagc
ctggcgtgtttggacgaggccgatcacacggttggcttcctgctgcagctctccagcttc
tgcaaggagtggcagttccacctgcccaaactgctgcgggacgtacaggtgaacctgtgc
tatctgtgccaaacctgcacctacctgctgcacagcaagaagatgctccaccactacctc
caggccaaaaatggtgaagcgttgccgcctggtcccctccccaggacacagcgggccccc
cagaccccgtctaaagaggcggccggtggaggagagagagaggaagccgagcagaaggcc
ctgctggctgtgcagtgcagcctcctaaaaatactcagcaaaacgctggcaactctacag
cacttcactccggactgctgccagatcctcctggaccagagtatggacctggcagagtac
cggaccctgtttgtgctcagcttcacgacgcccgcattcgaccccgatgtggctccttcg
tttgggaccctgctggccacaatcaatgtggccctgagcatgttgggagagatcgagaag
aagaaagagccggtgtctgtgagcatcgcctcgctggcctcctcggaggagatccaagct
ctgaagtcgctgctgatgttcaccatggagaactgtttctacgtgctgatctctcaggct
gtgcgctgcctcaaagacccctccatcctcccccgggacaaacagaggctcaaacaggag
ctcagctcggaactgagcactcttctttcgagtctttcccgccatttccgcaggggatct
ccgtcgtctccggccagcagcatgctcccctccacccaaaacaagcctcccaccccaggc
tctaaggccagccacgaaggtcaggagcccttcatccagctcgtgcaggcttttgtaaga
ctcgtgcagagatag
DBGET
integrated database retrieval system
