Eublepharis macularius (Leopard gecko): 129334642
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Entry
129334642 CDS
T09084
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129334642 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129334642 (SKIC3)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129334642 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_8
TPR_11
TPR_17
ANAPC3
TPR_9
TPR_15
TPR_7
ARM_TT21_C
BTAD
ARM_TT21_2nd
TPR_5
Fis1_TPR_C
TPR_30
HrpB1_HrpK
TPR_20
Motif
Other DBs
NCBI-GeneID:
129334642
NCBI-ProteinID:
XP_054842849
UniProt:
A0AA97JTK0
LinkDB
All DBs
Position
8:complement(55344407..55443551)
Genome browser
AA seq
1567 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKATELEPGQLLAWQGLANLYEKTNHAGTREDLVNVYQKLLELYESTDKQKWCEVCK
KLVDLYHQEKKFLQVARFWHKLIKTRQEEGADNIELHQLWQRLVQLLAECVHLQDNETQQ
LLLDAFEQAVNSSDVVPSEEHQKLYREFIQCLSKFPHEFPRLKKTCEDMIVLYPAVSYPM
EVLCLHFIQSGSFTEEALDCCHKLLNIDSRSGPALIGLGIQSLQEKKYEDASRNLTEGLQ
QTSQCSVGWYYLGETQVKMHKFREAVHSCNQALKTVGQLTESSSSQQQKNHANCLKAKAL
IKIPGTDSAEEAINSLDQVLDINNDPKLIALKGQAYLNKGLADALTIVEELKLLHPDLAE
THYLEGLIYYKQKNYYQAETSFQRAIEREAEVADFHFSLGLTYWFMSEETRREKTKALTQ
FLKAAKLDNYLGSAFHYLGQYYRDIAGDKNRAVGCYKKAFEKDRMDGEAGAAVVDLSTEL
GDLETALAVLTEVTERASAGRAKWAWLRRGLYYLRVGQHSEAVADLQAALRADPKDSNCW
ESLGEAYLSRGGYTTALKSFRKARELNSKSIYSVYKAAAIEQILGKYKDAIMEYQHILKK
SKDYVPALKGLGECYLMLAKSALADYLDGKALDYIEQSLYFLARAAKHRPEVSCLWKLLG
DACSSVCVISPSKVNVKVLGFLIGQTGDKHALKKSDLLNLGGRCYGRGVKLMSSPNMWCD
LGINYYHQAQHLKSISSNKNEISELLEKSVQCLKKAVRLESKNHLYWNALGVVASCKGVA
NYALAQHSFIKSIQAEQINVVAWTNLGVLYLTSGNVEQAHEAFKVAQSLEPSYLTCWIGQ
ALIAETVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLKDKTNRNTELYRYSILQMNA
VVGAQIAMTKYTERIQNDACAFTMLGYLNEYLQLKKQAADAYQRAVLLLKNSEDKDKYNT
AMRNYGRSLCVLGHFDEAIQAYLSTLLTEFDDIVGIAQAYFKKGHFQESQKAYERALSVS
DCEQDKACILTALAIMECKQNQVDAAKTLLFKCSILQESNMESLQALCTLGLIKQDATLA
TAALKELLKHRERKDNVYEKCLLTSAVYALQGRSLAVQRQVSKAVHSNPDDPGLWSLLSR
LVPQYTPKIAKGGAVAGTVAHILDLNHGKKALLNTAVNQLAFGYHTAEDEKNNALKNIQK
AVHLSPDNPAAWAVLLAACHAENTIVCLHNTYPKRTNLEQKLVATISAKTKEKDFLASHA
QSLEEWSLFQAITGLNETGRTSEAEFLCTKGLKIFPEQSTLYLLLRQVQCKTLLQSHKEL
PDAILEELRKVVMSNSTSVTAWHWLAQVYQSQRMMVAAEMCYRKSLQLASQQDSWNGKLS
SLLRLAKLALEVCMANISNDHWPSLVQEATTEVLKLSLCPLGILLQALLQYSRKMGSRET
RRMLERVVYQLEYPETVVSVARWYLLRHLYAKYDYELIDALVGNAKVNGDVRALELDKKL
SAAEASS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaagttaaagcggctttgaaaagtgccagagatgcaataagaaataaa
gagtataaagaagcactgaagcattgcaaggcagtattgaagcaagaaaaaaataactac
aatgcctgggtatttattggtctggcagctgctgagctggaacagcctgatcaagccaaa
ggcgcctataaaaaggctacagaacttgaaccagggcagttacttgcatggcagggccta
gccaatttgtatgaaaaaacaaaccatgctggtaccagagaagatttggttaatgtatat
cagaaactcctggagctctatgaaagtactgataagcagaaatggtgcgaagtatgtaaa
aaacttgtggacctgtatcaccaagaaaaaaaattccttcaggttgctcgattttggcac
aagctgataaaaacaagacaggaagaaggtgctgataatattgaacttcaccaactgtgg
cagaggttggtccagttacttgcagagtgtgtacacctccaagacaatgaaactcagcag
ttgcttcttgatgcatttgagcaggcagtgaattcctcagacgtagttccaagtgaagag
caccaaaagctttacagagagttcattcagtgcttgtcaaaatttcctcatgagtttcct
agactgaagaaaacctgtgaagatatgattgttttgtatcctgcagtgagttatcctatg
gaagttctttgcctgcacttcattcagtcaggcagtttcactgaggaggctcttgactgt
tgtcacaagcttctaaatattgactcaagaagtggtccagctctcattggcttagggatt
caatcccttcaggaaaaaaaatatgaagatgctagtagaaatctaacagaaggtttgcag
cagaccagtcagtgttcagtaggatggtattacttaggggaaacacaagtgaaaatgcac
aaattcagagaagctgttcattcttgcaatcaagctcttaagacagtggggcaacttact
gaatccagttccagtcagcaacagaaaaaccatgctaattgtctcaaggcaaaggccctg
attaaaattccaggcactgactctgcagaagaagccataaattcccttgatcaggttttg
gatataaacaatgaccccaagcttatagcccttaaaggacaggcctatctaaataaagga
cttgctgatgctttaacgatagtagaagagcttaaactgttgcatcctgatttggcagaa
acccactatctggaaggattgatctattacaaacaaaagaactactaccaggcagaaaca
agttttcagagagctattgaaagagaagctgaagtagcagactttcatttctctttgggc
ctcacttactggtttatgagtgaagagacaagaagagagaaaaccaaagctctcactcag
tttctgaaggcggcaaagctggacaattacctggggagtgctttccactacttaggtcaa
tattacagggacattgctggagataaaaatagagctgttggctgctataagaaggcattt
gagaaagacagaatggacggagaagctggagcagcagtagtagatttaagcacggagctt
ggagacttggaaactgcccttgctgtcttgacagaggtaacagaaagagcaagtgctggg
agagcaaaatgggcctggctccgtcgtggactttattacctaagagttggtcaacattca
gaagcagttgcagatttgcaggcagctctgcgagctgatccgaaggattccaactgctgg
gaatctctaggagaggcatatctgagcagagggggctacacaacagcactaaagtctttc
agaaaagccagagaactgaattccaagtctatatacagtgtttataaggctgcagcaatt
gagcagattctaggaaaatataaagacgctatcatggagtatcagcatatcctgaagaaa
tcaaaagattatgtccctgctctgaaaggtctgggagaatgctatctcatgttggcaaag
agtgctcttgctgactatctagatggcaaagctctggactacatagaacaatctctttat
tttttagcacgagcagcaaagcatcgtcctgaagtatcttgcctttggaaactgcttgga
gatgcgtgcagtagtgtgtgtgtaatttctccatccaaagtgaatgtgaaagttttagga
ttccttattggtcaaactggtgacaaacatgcactaaagaaaagtgatctgctcaatctg
ggtggaaggtgttacggcagaggagtgaaactgatgtcctcaccaaatatgtggtgtgat
cttgggataaattactaccatcaggcccaacaccttaaatcaataagcagcaacaagaat
gagatcagtgaactattagaaaaatctgtacagtgtcttaaaaaagctgtgagactagaa
agtaaaaaccatctttactggaatgccttgggtgtggtggcctcttgcaaaggtgttgcc
aactatgctcttgcacagcattcgttcattaaatctattcaagctgaacaaattaatgtt
gttgcctggaccaatttgggagtcttgtatttaacaagtggcaatgtagagcaagcacat
gaagccttcaaagtagcccagtcccttgaaccctcttatctgacatgttggatcgggcag
gctcttattgcagaaacagtaggcagctatgaaactatggacctcttcaggcacaccact
gaactcagcatgcatactgaaggggcaaaaggctatgcccactgggtatgctcaactctg
aaagataaaaccaatagaaacactgaattgtatagatacagtattcttcagatgaacgct
gttgtcggagcacaaatcgctatgaccaaatacacagaaagaatccaaaatgatgcgtgt
gccttcacaatgcttggttatttaaatgaatatctccagctgaaaaaacaggcagcagat
gcataccaaagagcagttctgttgctgaagaattctgaagataaggacaagtacaataca
gcaatgagaaattatggtagatcactgtgtgttctaggtcattttgatgaagccatccag
gcttatttgtcaactcttctcacagaatttgatgatattgtaggaatcgcccaagcatac
ttcaagaaaggccatttccaagaaagtcagaaagcttatgaaagagcactctctgtttct
gactgtgagcaagataaagcatgtatcttaacagctcttgcaataatggaatgcaaacag
aatcaggtggatgctgcaaagactctcttgtttaagtgctctatattacaggaatctaat
atggaaagtctgcaagctctgtgcactttagggctgataaagcaggatgctaccctggca
acagcagcacttaaagaattactaaagcacagagaaaggaaagataatgtttatgagaag
tgccttcttacatctgctgtctatgcattgcaaggcagaagcttagcagtccagagacaa
gtttctaaagctgttcacagcaacccagatgatcctggcctctggtcccttctgtctcga
ctggtacctcaatatacaccaaaaattgcaaagggtggggctgtggcaggaactgttgct
cacatacttgatttaaaccatggaaagaaagccttgctaaacacagcagttaatcagttg
gcatttggatatcacactgctgaagatgaaaagaacaatgcactgaagaatatccagaag
gcagtgcatctttctcctgataatcctgctgcttgggcagtacttttggctgcctgtcat
gctgaaaatacaattgtatgtctgcataatacatatcccaagaggacaaatttggaacag
aagttagtagccaccatttcagctaaaactaaagaaaaggattttctagcttcccatgca
caatctcttgaagagtggtcgcttttccaggcaattactggcttaaatgagactgggaga
acctcagaagctgagtttctctgcacaaagggattaaaaatttttcctgagcaatcgact
ttgtacttgctcttaaggcaagttcagtgtaaaacacttctacagtctcacaaagagctt
ccagatgccatcttagaagagcttcgaaaggtggtaatgtccaattccacttcagttaca
gcttggcattggttggcacaagtgtatcagtcacaaagaatgatggttgctgcagagatg
tgctaccgaaaaagtctgcagctggcatcccagcaagacagctggaatgggaagctctct
agtctactaagacttgctaaacttgccttggaggtctgcatggctaatatttcaaatgat
cactggccatctttggttcaagaagccacaacagaagtcttgaaactttccttgtgtcca
ctgggaattcttttacaagcccttctgcagtacagtcgcaaaatggggtcaagggaaact
cgtcgcatgctagaaagggtggtgtatcaactggaatatccagaaactgtagtttcagtt
gcccgatggtatctcctcagacatttatacgcgaaatatgattatgaattaatagatgct
cttgtaggaaatgcgaaagttaacggagatgttcgcgctctggaactagacaagaaactg
tcagcagcagaagcatcctcctaa
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integrated database retrieval system
