Eublepharis macularius (Leopard gecko): 129345448
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Entry
129345448 CDS
T09084
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emc04040
]
129345448 (TRPC4)
Ion channels [BR:
emc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129345448 (TRPC4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
129345448
NCBI-ProteinID:
XP_054858586
UniProt:
A0AA97LK60
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Position
18:8479904..8583006
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AA seq
984 aa
AA seq
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MAQFYYKRSINAPSRDRIPLRIVRAESELSPAEKAYLNAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLNFNVYLGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSTDVDSLRHSRSRLNIYQALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEIILNYRDDNSIIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVIIGFLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRDSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEANNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIRWLWRRLCGKKIRKKPESFGTIGVSTTHFLPRRAADNLRRHHQYQEVMKN
LVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKLPNLQGSKPGKDDS
SLPEAEEGEKAEGCEKVKRRSLSLFDITTMIRPKATARAAEAHILSNGSVLMASGSTKEK
QKKVNFMADVKKFGFFHKQSKNMAAEQSANQIYSISEEVSRRQMEEQQEEATELMEEELV
VNCELNIHSPSDKCTVISDKQAKNETLDLKLDEVISSADVKKSMRLDSEPLTPKDLLDKE
PDFGRDSAGKQETIVQDNYFTTRL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctattacaagagaagcatcaatgccccttccagagaccgcatccctctc
cgcattgtccgagccgagtctgaactctcacctgctgagaaagcttatttgaatgctgtg
gagaaaggcgattatgccagtgtgaagcaagcgctggaggaagctgaaatttactttaaa
atcaatattaattgcattgatcccctcggaaggacggctctcctgattgccattgagaac
gagaacctggagctgatagagctcctcttgaacttcaacgtgtacctgggcgatgctctg
cttcatgccatcaggaaggaggtggtgggggctgtcgaattgctcctcaaccacaagaaa
cccagtggggagaaacaggtgccacccatacttctggataaacagttctcggaatttacc
ccagacattacgcccattatcctggctgcccacaccaacaattatgaaattataaaactt
ttagtccagaaaggtgtttctgtgcccaggccgcatgaagtccgctgtaactgtgtggag
tgcgtctccagcacagacgtggacagccttcgccattcccgatcccggctaaacatctat
caagctctcgcaagcccttctttgattgccctgtccagcgaggatccatttcttacagct
tttcaattaagttgggaacttcaggaactgagcaaagtggaaaatgagtttaaatcggaa
tatgaagaactgtcccagcagtgcaagcagtttgcaaaagaccttttggatcagacaagg
agttccagggagctggaaattattcttaactacagagacgataacagtataatagaagag
cagagtgggaatgacctggcgagactgaaactggccattaagtaccgtcagaaagagttt
gttgcccagccaaactgccagcagctccttgcctctcgctggtatgatgagttccctggc
tggaggaggcgccattgggctgtgaagatgttgacttgcgtcatcattgggttcctcttc
cccgtcttctccgtctgctacttgatagctcccaagagccccctggggctgttcatcagg
aagcctttcatcaaattcatctgccacacagcatcctacttgactttcttgttccttttg
ctgctcgcctctcagcacattgacagatcagacctgaacatgcaggggcctccaccaacc
attgtcgagtggatgatattaccgtgggtcctgggctttatatggggtgaaattaaacaa
atgtgggatggcggactgcaggattatattcatgactggtggaacctgatggattttgtc
atgaactccttatacctggcaaccatttctttgaaaattgttgccttttcaaagtacagt
gggctcgtgccaagagacagctgggacatgtggcaccccacgctggtggctgaggccctc
tttgccattgctaacatcttcagctctttgcgcctgatctccttgttcactgccaattct
catctgggaccattgcagatctcgctgggaagaatgttactggacattttaaagtttctg
ttcatctactgtcttgtgttgctggcttttgcaaatgggctgaaccagctgtatttctac
tatgaaacaaacgaagccaataattgcaaagggatacggtgtgaaaaacaaaacaatgct
ttttcaacgttatttgaaactctccagtcactcttctggtccgtctttggactcatcaac
ctgtatgtgaccaatgtgaaagccaggcatgagttcacagagtttgtcggggccaccatg
ttcggcacgtacaatgtcatctcactggtcgtcttgctcaacatgctgatcgccatgatg
aacaactcataccaactcattgcagatcatgcggacatcgaatggaaatttgctcggaca
aaattgtggatgagttactttgaagaaggagggacgcttcctacccctttcaatgtgatc
ccaagtccaaaatctctctggtacctgatccgatggctgtggagacgactgtgtgggaaa
aagatccgaaagaaaccagagagttttggaacgatcggggtaagcaccacccatttcctc
cccagacgtgcagctgataatttgcggagacatcatcaatatcaggaggttatgaaaaac
cttgttaagagatatgtggcggcgatgatcagagatgctaaaacggaagaggggctaaca
gaagagaactttaaggagttaaagcaagacatctccagttttcgcttcgaggtcctcggt
ttactaaagggaaacaaactgcccaatttgcagggctcaaaacctggcaaagatgactcc
tctttaccagaggctgaggaaggagaaaaggccgaaggatgtgagaaagttaagcggaga
agcctgagcctttttgatatcaccaccatgattcgcccaaaggctactgcaagggctgct
gaagcacacatcctgagcaacgggtcggtgctgatggcatccgggtcaaccaaggaaaag
caaaagaaggtgaacttcatggctgatgtaaagaagttcgggttcttccacaaacagtca
aaaaacatggctgccgagcaaagtgccaatcaaatctactccatttctgaggaagtctcc
cgtcgacaaatggaagagcaacaggaggaagccacggagctgatggaggaggaactggtt
gtaaactgtgaattaaacatccacagccccagtgacaagtgcacagttatcagtgataag
caagctaaaaatgagactttggatttgaagctggatgaggtcatttcctctgctgacgtg
aagaagagcatgagactggactctgaaccgctcacaccaaaggatttgctggacaaggag
ccggattttggtagggactctgctgggaaacaagagacaattgtgcaggacaattacttc
acaacaaggttgtga
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