Emticicia sp. 21SJ11W-3: MB380_04040
Help
Entry
MB380_04040 CDS
T09449
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
emz
Emticicia sp. 21SJ11W-3
Pathway
emz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MB380_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emz03021
]
MB380_04040
03400 DNA repair and recombination proteins [BR:
emz03400
]
MB380_04040
Enzymes [BR:
emz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MB380_04040
Transcription machinery [BR:
emz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MB380_04040
DNA repair and recombination proteins [BR:
emz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MB380_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UTA68980
LinkDB
All DBs
Position
954661..955650
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVMEKADDFHGFFEFKPLERGYGVTIGNALRRILLSSLEGYAITAVRFP
GVLHEFSSIEGVVDDVTEIILNLKMVRFKKVSDYVDNKFTVRVKNQSILTAGDLGKFTQS
FQILNPDLVIARLDDQREIEVEIIVDKGRGYVSAEEHKQTDLPIGFISVDSIYTPIKNVK
YSIENTRVEQRTDYEKLLLEIKTDGSIHPERALQEAAHILIQHFLKFTDENMVFDTKKDD
EDNIVDEEFLHMRKLLKTSLQDLDLSVRAYNCLKSADIRTLGDLARLEVADMMKFRNFGK
KSLTELEQLVADKGLHFGMDVTKYKLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattagcatttcaaatgcctgacaaggtagtcatggaaaaagcagacgacttc
catggctttttcgagtttaagccacttgaaagagggtatggtgtgaccatcgggaacgcc
ctacgtcgtattttgttatcctctcttgaaggttacgcaatcacggctgtaagatttccc
ggggtattacacgaattttcgagcattgaaggggttgtagatgatgtgacggaaatcatc
ttaaaccttaaaatggttcgtttcaagaaagtctcagattatgtagataataagttcacc
gtcagagtaaaaaatcaaagtatactaactgctggcgacctgggcaaatttacacaaagt
tttcagattctgaatcctgatttggttattgcccgtttggacgatcaaagagaaatagaa
gttgaaattatagtagataaaggacgtggttatgtttctgctgaagagcacaaacaaact
gatttaccaattggttttatatcggttgactcaatctatacccccattaaaaatgtgaag
tatagcattgaaaatacccgtgttgaacaacgtactgactacgaaaaactattgcttgaa
atcaaaactgatggttctatccacccggaaagagctttgcaggaagctgcacatattctg
attcagcacttcttgaagttcactgacgagaatatggtatttgataccaagaaagatgat
gaagacaatattgttgatgaagaattcttgcacatgcgcaagctgttgaagacttctcta
caggatttggatttgtcggttcgtgcatacaactgtttgaaatctgcggatatccgtaca
ttaggcgaccttgcaagactggaagtagccgacatgatgaagttccgcaatttcggtaag
aagtcgttgactgagttagagcaactggttgccgacaaaggtcttcactttggtatggat
gtaacgaaatacaaattagacgaagattga
DBGET
integrated database retrieval system
