Enterobacter sp. HK169: EnteroDNA1_02982
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Entry
EnteroDNA1_02982 CDS
T11374
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
enhk Enterobacter sp. HK169
Pathway
enhk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
enhk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EnteroDNA1_02982 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enhk03021
]
EnteroDNA1_02982 (rpoB)
03400 DNA repair and recombination proteins [BR:
enhk03400
]
EnteroDNA1_02982 (rpoB)
Enzymes [BR:
enhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EnteroDNA1_02982 (rpoB)
Transcription machinery [BR:
enhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EnteroDNA1_02982 (rpoB)
DNA repair and recombination proteins [BR:
enhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EnteroDNA1_02982 (rpoB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AOL14139
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Position
3165159..3169187
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALQYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKLIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGAYISETIRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQEEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLKKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagcagccttccgctccgtgttcccgattcag
agctacagcggtaactccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtactttcgttatcaacggt
actgagcgtgttatcgtttcccagctgcaccgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacacactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgagttcgatccgaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcgctgcaatacaccactgaacagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagctgcagatggag
ctggtgccggaacgtctgcgtggcgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaactcatcgaagttccggttgagtacattgcaggaaaagtagccgcgaaagat
tacgttgatgagtcaacgggtgagctgatctgcccagcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggtcacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggcgcgtatatttctgaaactattcgcgtcgacccaaccaccgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gcggaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccaattccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgca
gcagtgaaagagttcttcggttccagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctctgcactcggcccaggcggtctgacccgt
gaacgcgcaggctttgaagttcgagacgtacacccgacgcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggtttcctcgagaccccgtaccgtaaagtgactgacggtgttgtaacc
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagtcgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcagttgctaaacgt
ggcggtactgttcagtacgtcgatgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagctggtatcgacatttataacctgaccaaatacacccgctctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcatgcgtgtct
cgtgacaccaagctggggccagaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaaactggatgagtccggtatcgtttacatcggtgcggaagtgaccggcggc
gacattctggttggtaaggttacgcctaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcacccgtgacggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcagatcctcgaagcgggtctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggccgttaaacgtcagatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcgaaaggtattggcgacaagattaacgccatgctgaagcagcaggaagaagtcgcgaaa
ctgcgcgaattcatccagcgtgcctacgatctgggtaccgacgtgcgtcagaaagtcgac
ctgaataccttcagcgatgaagaagtgctgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcaacgccggtcttcgatggtgcgaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcggcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccatcagatggagccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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