Euhalothece natronophila: FRE64_02940
Help
Entry
FRE64_02940 CDS
T06117
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
enn
Euhalothece natronophila
Pathway
enn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
enn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRE64_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
enn03019
]
FRE64_02940
03009 Ribosome biogenesis [BR:
enn03009
]
FRE64_02940
Messenger RNA biogenesis [BR:
enn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRE64_02940
Ribosome biogenesis [BR:
enn03009
]
Prokaryotic type
rRNA helicases
FRE64_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_C_2
Flavi_DEAD
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDZ38986
UniProt:
A0A5B8NJ30
LinkDB
All DBs
Position
complement(646758..648164)
Genome browser
AA seq
468 aa
AA seq
DB search
MTISFQSLGISEARSKQLEKLGFEQPTDVQTQAIPEILKGKDVVGQSQTGTGKTAAFSLP
ILEQIDVEQTAVQALILTPTRELAQQVADAMKTFSHDRALKVLTVYGGQSIDRQIQQLKR
GVQVIVGTPGRIIDLLNRKALRFETLRYVVLDEADEMLSMGFIDDVREILRKAPEQRQTA
CFSATMPRQIQDLIKQFMDEPVRLKIQQPKGSPKQIQQRVYKVPRGWNKIQALKPILAVE
DPESALIFVRTKRTANEINQQLQASGYSVDEYHGDLSQVQRERLVQRFRNNQVRLVVATD
IAARGLDVENLSHVINFDLPDNIETYIHRIGRTGRAGKEGIAVSLSLPRDRHTLRQIEGR
LRQRLNFLSIPKRSEIEAQRLEKLREDLHNSLGGERMASFLPLVRELSDEYDPHAIAAAA
LQMIYDESRPNWLDENWQDPPSDSPKPKPRSKRGSNKPSIRSASAKRS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttcttttcaaagtctcggtatctctgaagcaagatcaaagcaattagagaaa
ctgggcttcgagcaaccgactgatgttcaaacacaagccatccctgaaatcctgaaaggc
aaggatgtggtaggtcagtcccaaacgggaaccggcaaaactgctgccttttccctgccc
attttagaacaaattgatgtggaacagacggcggtacaggcgttaattttgaccccaaca
cgggaattagcgcagcaggtagccgacgcgatgaaaactttttctcacgatcgcgctctg
aaggttttaaccgtctatggcggtcagtccattgatcgacaaatccaacagcttaagcgt
ggcgtgcaagtgatcgtgggaaccccagggcgcatcattgaccttctcaatcggaaagcc
cttcgttttgagactctacgctatgtggtgttagacgaagccgacgaaatgctcagtatg
ggctttattgatgatgtgcgagaaattctccgtaaagcgccagaacagcgacaaaccgct
tgcttttccgcaaccatgccccgacaaatccaagacttgattaaacagtttatggatgag
ccggtgcgcctgaaaatccaacagcccaaaggtagcccgaaacaaattcaacaacgggtg
tataaagttccccgaggctggaataaaatccaagctcttaagccaattttagcggtagaa
gaccccgaatcagcattaatttttgttcgtaccaaacgcacggctaacgaaattaatcag
cagttacaagccagtggctacagtgtggatgaatatcatggcgacttaagccaagttcaa
cgggaacgtttagtgcaacgctttcggaataaccaagtgcgcttagtggtggctactgat
attgcagcgcgaggcttagatgtggaaaatctttcccatgtgattaacttcgatcttcct
gataatatcgaaacttatattcatcgcattggacgcactggacgcgctggaaaagaaggg
attgcggttagcttaagtttaccgcgcgatcgtcataccctccgtcaaattgaagggcgt
ttacgtcaacggctgaatttcctttctattcccaagcgatccgaaattgaagcccaacgc
ttagaaaaattacgagaagacttgcacaatagcttagggggcgaacggatggcttccttc
ttacccttagtgcgagaactcagtgatgagtatgatcctcacgcaatcgcggcagccgcc
ttacaaatgatttacgatgaaagtcgccccaattggttagatgaaaactggcaagatccc
cccagtgatagtccaaaacccaagcctcgtagcaaacgtgggtctaataagccctcaatt
cgttctgcttctgcgaaacgctcgtaa
DBGET
integrated database retrieval system
