Endozoicomonas sp. SCSIO W0465: MJO57_13315
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Entry
MJO57_13315 CDS
T08210
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
enw
Endozoicomonas sp. SCSIO W0465
Pathway
enw03410
Base excision repair
enw03430
Mismatch repair
enw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
enw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MJO57_13315 (recJ)
03430 Mismatch repair
MJO57_13315 (recJ)
03440 Homologous recombination
MJO57_13315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enw03400
]
MJO57_13315 (recJ)
DNA repair and recombination proteins [BR:
enw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MJO57_13315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MJO57_13315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MJO57_13315 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
SIS_2
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
USE39041
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Position
complement(3057156..3058832)
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AA seq
558 aa
AA seq
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MDPLLARIYSARGVKTQDDLPRQLQQLSDYRQLKDIDKAADILAEAIINQRRLLIVGDFD
CDGATSSALGVLALRSMGGHAEFLVPNRFEYGYGLTPEIVAAALPFQPDVLITVDNGISS
LAGVLAAKKRGMKVVVTDHHLAGRELPEADAIVNPNQPDCHFPGKNTAGVGVIFYLMCAL
RTLLRSRGYFQERKEPNLAELLDLVALGTVADVVKLDSNNRILVSQGLARIRSGRCRPGI
TALIDISGRNAGKLVASDLGFALGPRLNAAGRLDDMSIGIELLLCEDIHRARELAFELDG
LNRDRKAIEGSMQSQAMAELEKIRFDQQTELPWGVSLFQASWHQGVVGILASRVKEKLNR
PVIAFAEADNLGGEPELKGSARSIQGLHMRDALDNIARENPGLIIKFGGHAMAAGLSIQK
SKFSAFKDAFDLEVRKVLTADDLQAEVHTDGELMPGQVTMATAYTLREGGPWGQSFPEPC
FDGQFQLLQQKLVGGKHLKMVLRIPGSEVWLDAISFNIDNRVWPNPNIRQIKAVYKLDIN
EFRGQNNLQLMVEHFEPV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatcccctgctggccagaatttacagtgcccggggcgtaaaaactcaggatgatctt
cctcgccagcttcaacagttaagcgactaccggcaactgaaggatatcgataaagccgct
gacattctggcagaggccattatcaaccagcgacgcctattaatcgttggagacttcgac
tgtgatggtgccaccagcagtgcgctcggtgttctggccctgagaagcatggggggtcat
gctgagtttctggtacccaatcgttttgagtatggctatggtttgaccccagaaattgtt
gcagccgctcttccctttcaacccgatgttttaatcaccgttgataatggtatctccagc
ctcgccggggtactggcagcaaagaaaagaggcatgaaagttgtggttaccgatcatcac
ctggcgggtcgcgaactgcctgaagccgatgcgattgttaaccctaatcaaccagactgc
cattttcccggcaaaaataccgccggagttggcgttattttctatctgatgtgtgccttg
agaaccctgttgcggtcgcggggttattttcaagaaagaaaagagcctaacctggccgaa
cttctcgaccttgtggcgctcggcactgtggctgatgtggtcaagctggacagcaataac
cgcatactggtatcccaggggcttgcccgcatccgctccggccgttgccgaccgggcatt
accgcactgatcgatatttccggcagaaatgctggaaaactggtagcgtcagacctcggc
tttgccctgggcccgagactcaatgcggccggacgccttgatgatatgtctatcggtatc
gaactactcctttgcgaagatatccatcgcgctcgcgagctggcctttgaactggacggg
ctgaaccgcgaccggaaagccattgagggcagtatgcaaagtcaggcgatggcagagctg
gagaaaatccggtttgatcagcaaacagagctgccatggggcgtcagtctatttcaggca
agttggcaccagggcgtggttggcattctggcttcacgggtaaaagagaagcttaatcgt
ccggttatcgcttttgctgaagctgataaccttgggggagagcctgaactcaaaggttct
gccaggtcgattcagggactgcacatgcgtgatgcactggacaacatcgccagagagaac
ccggggcttattattaaatttggtggacacgccatggcagcggggttatccatacaaaaa
tcgaaattcagcgcatttaaagatgcttttgaccttgaagtcagaaaagtattgaccgct
gatgaccttcaggcagaagtgcatactgatggtgaactgatgcctggtcaggtaaccatg
gcaactgcatatacccttcgtgagggagggccatggggacaaagttttcctgagccctgc
tttgatggccaattccaacttttacagcagaagctggtgggagggaagcacctcaagatg
gtactcagaatacccggcagtgaggtctggctggatgctatttcctttaatattgataac
cgggtgtggcctaatcccaatattcgtcagatcaaggcggtctataaactcgatatcaat
gaatttcgtggtcagaacaatctgcagctaatggttgaacattttgaaccagtttaa
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