Eucyclogobius newberryi (tidewater goby): 140349561
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Entry
140349561 CDS
T10929
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140349561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140349561
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140349561
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140349561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
DUF3819
Motif
Other DBs
NCBI-GeneID:
140349561
NCBI-ProteinID:
XP_072292047
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MQAQTQPQPHGAPKVPQPGQTSTLVTTTTTTTTVAKTITNTRPTPSNLKKDVPPSINTTN
IDTLLVATDQNERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEVMPWVSQYL
VMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLTETYRNIKVLLTSDKAAANFSDRSLLKN
LGHWLGMNTLAKNKPILYTDLELKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRP
QNPWTMAIMNVLAELHQEHDHTLNLKFEIEVLCKNLSLDINDLKPGNLLKEKDKLKNLEE
QLFAPKKEAKPPEELLPVSSTGDFVPFAPPSTPAATTTPCTTTGPPTPQFSYHDINVYAL
AGLSPHININANIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKD
FALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNNFAAGLRAPTPQQREM
MEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLT
YQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATD
DVAQIYDKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAV
EGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVE
AVELLIRNHLVNMQQYDLHLAQSMENGMHYMAVAFAMQLVKLLLVDERSVSHVTEADLFH
TIETLMRICAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPP
GLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMC
VEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKIKLLNKV
LGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHIL
RPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNK
PMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPF
TPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEP
GNRYNIQLINALVLYVGTHIHNNLTASMSNITHSAHMDIFQNLAVDLDTEGRYLFLNAIA
NQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIK
NPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcagactcagccccaaccacatggggcccccaaagttcctcaacctggccaa
actagcacactggttactacaaccaccactaccaccacagtagccaagaccataaccaac
acaagaccaacgcctagcaacctcaaaaaagatgttcctccctccataaacactacaaac
attgacaccctccttgtggccactgaccagaatgaaaggattgtagaacctccagagaat
gtacaggaaaagattgcatttattttcaacaacctttcacagtcgaacatgacccaaaag
gttgaggagttaaaggagacggtaaaggaagaggttatgccctgggtttcacagtatctg
gtgatgaagcgggtcagtattgagcccaattttcacagcctttactcaaactttcttgac
acactgaagaacccagagtttgtgaagatggttcttactgaaacctatcggaatataaag
gttcttttgacttctgataaggcagcggccaatttttcagaccgctcactgctcaagaac
ttgggtcactggctaggaatgaatacgttggccaaaaacaaacccatactctatactgat
ttggaactaaaatctcttctactggaagcctatgtgaaaggccaacaggagttgctttat
gtggttccatttgtggctaaagttttggaatccagtcttagaagtatggtttttaggccc
caaaatccctggaccatggccatcatgaatgtgcttgctgagctgcaccaggaacatgat
cacacgctaaacctcaaatttgaaattgaagttctgtgtaagaatctgtcattagacatc
aatgatctaaagccaggaaacttgctgaaagaaaaagacaaactaaagaatttggaggaa
caactttttgcaccaaagaaggaggcaaaacctccagaggagctgctccctgtatcaagc
acaggggactttgttccatttgcgccaccctcaaccccagctgccaccaccacaccctgc
acaaccacggggcctccaacaccgcagttcagttaccatgacatcaatgtgtatgctttg
gctggcttgtccccacacataaacataaatgccaatattcccctcttacaagcccaccct
cagctcaagcagtgtgttcgtcagtcagtcgaacgcgctgtccaggagttggttcatccc
gtggttgataggtccatcaaaatagccatgacaacctgtgagcagatcatcaggaaggat
tttgccttggattctgaggagtcccgcatgcgtgtagccgctcaccacatgatgagaaac
ctgactgcaggcatggccatgataacctgccgtgagcctttgctcatgagcattgcaacc
aacctaaagaacaactttgctgctggactcagggcaccaacccctcaacagagagaaatg
atggaagaagctgctgcaaggattgctcaggacaactgtgaactagcatgttgcttcatt
caaaaaaccgctgtggaaaaagctggccctgagatggacaagagactagccacggagttt
gagctaaggaaacatgcgcgccaagaagggcggcgctactgtgatcctgttgttttaacc
taccaggctgaacgcatgcctgaacagatcagactcaaggttggtggagtggatcccaaa
caactggctgtttatgaagagtttgccaggaatgttccaggtttcttacccagtaatgat
ctctctcagcccactggcttcttggctcagccaatgaagcaacaggcatgggctacagac
gatgttgctcaaatctatgataagtgcatggcagatttggagcagcatcttcatgccatc
cctccagcactcgctatgaacccattaactcaggcactgcgcagcttgcttgaggctgta
gcgttggcaagaaactcaagagatggcattgctgcacttggcctccttcagaaggctgtg
gagggacttttagacgctaccagtggtgcagacgctgatttattgctgcgctacagagag
tgccacctgctcgtgcttaaggccctgcaggacggacgtgcttatggaccacagtggtgc
aacaagcagatcaccaggtgtcttattgaatgcagagatgagtacaagtacaatgtagaa
gcagttgaacttctgataagaaaccatcttgtgaatatgcaacagtatgacttacatctg
gcacagtcaatggagaatggaatgcactacatggcagttgcttttgcaatgcagttggtg
aagctgctgctggtagatgaacgtagtgtgagccatgtcacagaggctgacctcttccac
accatcgagactttaatgaggatttgtgcgcactcacgggccaatgcacctgaaggactt
ccacagctgatggatgtcgttcgatctaactatgaagcaatgattgatcgagcccacggt
ggaccaaacttcatgatgcactctgggatttcccaggcttcagagtacgatgatccccca
ggcctgagggagaaagcagagtacctactgagagagtgggttaatttgtaccactcagct
gctgctgggcgggacagtaccaaagccttttctgcatttgttggccagatgcaccagcag
ggtatcctgaagactgatgacttgatcacaaggttcttccggctgtgtaccgaaatgtgt
gttgagataagctaccgggcacaggctgaacagcagcacaacccagcagccagtgcagca
atcatccgtgcaaagtgttaccataacctggatgcatttgtgcggctcatagctcttctg
gtcaaacactctggagaagcaacaaacaccgttactaaaatcaaactcctcaacaaggtg
ctaggaattgtcgttggagtgttgatccaggaccatgatgtgcgtcagactgaattccag
cagctgccataccaccgcattttcatcatgctgctgctggagctcaatgctcctgaacat
gtgttagagaccatcaactttcaaacactgactgccttctgcaatactttccacatcttg
agacctaccaaagctccaggctttgtgtatgcctggctggaactcatctcccatcgcatt
tttattgcacggatgcttgcgcatacaccacagcagaagggctggccgatgtatgcacag
ttgctgattgatctcttcaagtatttggccccattcttgagaaatgttgagctcaacaaa
cctatgcaaatcctgtacaagggaacccttcgagtccttctggtcctgctgcatgacttc
ccagagtttctgtgcgactaccattatggcttctgtgatgtcatcccacccaactgcatt
caactccgcaacctcatactcagtgcctttccacgcaacatgaggctccctgatcctttc
acacccaatctcaaggtggatatgctgagtgagatcaatattgctcctcgaatcctcacc
aacttcacaggcgtcatgccttcgcagttcaagaaggatttggattcgtatttgaaaaca
cgctcaccagtcactttcttgtctgagctgcgcagcaacctgcaggtgtccaatgagccg
ggaaaccgctacaacatccagttgatcaatgcgttggtgttgtatgtgggcactcacatc
cacaacaacctcacagcctccatgagcaacatcactcactctgcacacatggacatcttt
cagaacctggctgtggacctggatacagagggccgatacttgttcctgaatgcaattgct
aatcagctgcgctaccccaacagccacactcactatttcagctgcaccatgctttatctc
ttcgctgaagcaaataccgaagcaattcaggagcaaattaccagggttctgcttgagagg
ctgattgtgaacagaccccatccatggggtcttctcatcaccttcattgaactgatcaag
aaccctgccttcaagttctggagccacgactttgtgcactgtgcccctgagattgaaaag
ctgttccagtcagtagcccagtgctgcatgggacagaagcaggctcagcaagtgatggag
ggaactggtgccagctag
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integrated database retrieval system
