Eucyclogobius newberryi (tidewater goby): 140350760
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Entry
140350760 CDS
T10929
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04510
Focal adhesion
eny04512
ECM-receptor interaction
eny04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140350760 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140350760 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140350760 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eny00535
]
140350760 (col9a1b)
Proteoglycans [BR:
eny00535
]
Extracellular matrix (ECM) proteoglycans
Others
140350760 (col9a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
140350760
NCBI-ProteinID:
XP_072292341
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MARGPGFRGPLLALLLQLVLICSAQRSQGPPGPPGVPGIDGIDGERGIDGEDGQPGPDGD
AGKPGSTGLPGLPGNDGLTGPVGDPGPDGPFGQKGEPGKAGPRGSAGVGPDGSPGPPGPG
GLLGEVGKVGPPGAMGVRGPAGPRGSQGPRGAAGALGSTDLCPNSCPPGMTGHPGLPGMK
GHKGVKGEAGEPGKQGHKGEEGEQGIPGEVGAQGSTGPQGTRGATGMMGPKGELGARGPD
GEPGPLGVAGATGDQGQRGIMGEAGPKGEVGVLGPRGITGVPGPKGEGGLPGVDGREGIP
GMPGAKGIIGKAGAPGEVGLQGFPGLPGVSGPSGLGGTKGDSGEPGFPGTIGSAGKTGER
GEQGELGPVGPIGEPGDIGGQGPTGPAGKHGARGPKGDPGLPGLPGPHGLPGVKGDRGER
GEAGPKGEQGSQGDEGNAGDKGDVGDSGEAGAKGEGGNPGETGKRGPEGSRGQPGIEGPP
GSPGPRGMQGNRGLPGARGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLTASLRRPESGVA
GLPGKPGPPGPPGQSGDNGLPGHAGARGLPGLKGPPGILGHKGPKGEMGDRGSRGPTVRG
PKGQPGPPGLPGEAGKPGYGRDGRDGQRGPPGVPGQSGVPGSPGAAGPNGYCDPSACNLQ
AGQQSLDVKGPAEN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggccccggctttagaggccctcttctggcacttctcttgcagcttgtcctg
atctgctccgcgcaaagaagtcaaggcccccctggacctccaggtgtgccaggaattgat
ggaattgatggggaaaggggcatagatggggaggatggacaacctgggcctgatggtgat
gcgggtaaacccggctctactggactacctggacttcctggaaatgatggactgactggc
cctgtcggagatcccggacccgatggccccttcggacagaaaggtgaacctgggaaagct
ggacctcgtggatcagctggtgttgggcctgatggatcccccggaccaccggggcctgga
ggactgctaggtgaagttggaaaagttggtcctcctggtgccatgggagtgaggggacca
gccggaccacgtggatcacagggacccagaggagcagctggggccttgggcagtactgac
ctgtgtccaaactcttgtccacctggaatgacagggcatcctggactccctggcatgaag
ggtcacaaaggtgtaaagggtgaagctggagaacctggcaaacaaggacacaagggagag
gaaggagagcaggggatcccaggggaggtcggagcccaaggatcaactggtcctcaggga
acccgaggagccactgggatgatggggcccaagggagagttgggggctcgaggtcctgat
ggagagccaggtccactgggagtcgctggagcaactggagaccaaggtcagagaggcata
atgggtgaggctggtcccaaaggtgaagtgggtgtcctaggaccaagaggaataacaggg
gttcctggtccaaaaggagaaggcggtcttccaggtgttgatggccgtgaaggtatacca
gggatgccaggcgcaaaggggatcatcggaaaggctggtgctcctggagaagtgggcctt
caaggatttcctgggttacctggtgtatcagggccaagtggactgggtggcacaaaggga
gattctggtgaacctgggttccctggaacaatagggtctgctggtaaaactggagagcga
ggagaacaaggagagctggggcctgttggacctattggtgaacctggagatattggagga
caaggccccacgggtccagctggaaagcatggtgccaggggaccgaaaggtgacccagga
cttcccggtctccctggtccccatggtcttcctggagtgaaaggagacaggggagagcgt
ggtgaagctggtcctaagggagaacagggctctcaaggtgatgaaggaaatgcaggagac
aaaggagatgtcggtgattcaggagaggcaggggcaaaaggagagggcggtaaccctggt
gagaccggcaaaagaggtccagaaggaagtcgaggtcagccaggcatcgagggaccccct
ggttcacctgggccgaggggcatgcagggcaacaggggcctaccaggggctagaggatcc
caggggccagcgggcaaggagccaagtgatcagcacatcaagcaagtttgtatgcgcgtc
atgcaagaacagttggctcagttaacggccagtctgcgaaggccagagtctggtgtggcc
ggtttacctggcaaacctggacctcctgggcctcctggacaatccggagataacggcctc
cccggacacgctggtgctagaggacttcctggtctaaagggcccacctggaatattaggc
cacaaaggaccaaaaggtgaaatgggagacagaggatccagaggacctacagtccgtgga
cctaagggtcagcccggaccaccaggccttcctggtgaggctggtaaaccaggctatggt
cgagacggacgtgatgggcaaaggggcccccctggagtcccgggacagtctggtgtacct
ggatcacctggagcagctggtcctaatggatactgcgatccatcagcctgtaacctgcaa
gctggccagcagtctctggacgtaaagggacctgcggagaactaa
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