Escherichia coli O7 K1 CE10: CE10_0151
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Entry
CE10_0151 CDS
T01999
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
eoc
Escherichia coli O7:K1 CE10
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoc03016
]
CE10_0151 (ligT)
Enzymes [BR:
eoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CE10_0151 (ligT)
Transfer RNA biogenesis [BR:
eoc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CE10_0151 (ligT)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AEQ11004
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All DBs
Position
complement(171560..172090)
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AA seq
176 aa
AA seq
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MSEPQRLFFAIDLPAEIREQIIHWRATHFPPDAGRPVAADNLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYATSFARGRTRYTPLKRWALTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcaacgtctgttctttgctatcgacttacctgcagaaatccgcgaacag
attatccactggcgcgccacacacttcccacctgacgcgggacgtccggtcgccgccgat
aatttgcatctgactctggcatttttaggcgaagtgagcgcagagaaagagaaggcgctt
tctcttttagccggacggattcgtcaacctggtttcacactcacgcttgatgacgccggt
cagtggctgcgttcgcgtgtggtgtggttagggatgcgacagccgccacgcggcttaatc
cagctggcgaatatgctccgctcacaggctgcccgcagcggttgttttcaaagcaatcgt
ccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccaggttttaactggtcgtatacggtgacggagttcaccctttacgccacctcgtttgcc
cgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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