Endosymbiont of Sipalinus gigas: NARSGI1_00420
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Entry
NARSGI1_00420 CDS
T06000
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eof
Endosymbiont of Sipalinus gigas
Pathway
eof03420
Nucleotide excision repair
eof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NARSGI1_00420 (uvrD)
03430 Mismatch repair
NARSGI1_00420 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eof03400
]
NARSGI1_00420 (uvrD)
Enzymes [BR:
eof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NARSGI1_00420 (uvrD)
DNA repair and recombination proteins [BR:
eof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NARSGI1_00420 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NARSGI1_00420 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BBA85195
UniProt:
A0A2Z5T8C3
LinkDB
All DBs
Position
join(45081..45864,45864..46996)
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AA seq
638 aa
AA seq
DB search
MKYISYFLNLNKNQKNIVLSKDKNIVVIAGAGSGKTKILIYRIIWLINKKKINPNSIMIV
TFSNKAVNEIKYRIKNILSDKYNNIIIGTFHSILYRMLKIHYKEAGLKNNFQIIDDNYQL
RIIKNIIKSLKLKNKLNIEKILKYINISKNKGIRINENYKNLYEENFIFKKIYILYQSEC
NKLNIIDFSEILIRTYELLNKNINILNLYKKKITNILIDEFQDTNEIQYLIIKLLLHNND
INIMIVGDSDQLIYEWRGAKIGESLNKFINDFSNSKIFYLDQNYRSTNNIIKAANNLISY
NKSRLKKKLWTKNEIGDFIYLYKAENEINEAKFISEYIKKNINNINNFAILYRNNYQSRI
IEEFLINNKIPYIIYGGLKFINRKEIKDILSYLMLILNRNDNISLERIINTPSRKIGKKS
IDIIKKESSLTNKSYWDVINYLVYNDKYKLHTKKLKNFIDIINNLDKIILDIPLHKKIHK
ILEYTKLFDLYKKDNFNSSKLDNLNELINSAYRFEKKNIYNKNILEEFISNMIIQYEDTN
ISNIENKVKLMTIHSSKGLEFKCVFIIGMEEGIFPSNKSIDNSNIEEERRLAYVGITRAM
KNLILTYSKFRLNCGKLITNKPSRFIYEIPIECIKVLN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatatatcatattttttaaatttaaataaaaatcaaaaaaatatagttttatca
aaagataaaaatatagtagttatagctggagctggaagcggaaaaacaaaaattctaata
tatagaattatttggttaataaataaaaaaaaaataaatccaaattctataatgatagta
acatttagtaataaagctgtcaatgaaataaaatatagaattaaaaatatattatcagat
aaatataataatattataataggaacttttcattctattttatataggatgttaaagata
cattataaagaagctggattaaaaaataattttcaaattatagatgataattatcaattg
agaataataaaaaatataattaaatcattaaaattaaaaaataaattaaatatagaaaaa
atattaaaatatataaatataagcaaaaataaaggaataagaataaatgaaaactataaa
aatttatatgaagaaaattttatttttaaaaagatatatatattatatcagagtgaatgt
aataaattaaacataatagatttttctgaaatattaataagaacatatgaattattaaat
aaaaatattaatatattaaatttatataaaaaaaaaataactaatatactaatagatgaa
tttcaagatactaatgaaattcaatatttaattattaaattattgttacataataatgat
ataaatataatgatagtaggtgatagtgatcaattaatatatgaatggagaggagctaaa
ataggagaatctctgaataagtttataaatgatttttctaattctaaaatattttatcta
gatcaaaattatagatctactaataatataataaaagcagctaataatttaatttcatat
aataaaagcagattaaaaaaaaaattatggactaaaaatgaaattggagattttatttat
ttatataaagccgaaaatgaaataaatgaagcaaaatttatatcagaatatataaaaaaa
aatattaataatataaataattttgctattttatatagaaataattatcaatctagaata
atagaagaatttttaataaataataaaataccatatataatatatggaggattaaaattt
ataaatagaaaggaaataaaagatatattatcatatttaatgttaatattaaatagaaat
gataatatttcattagaaagaataataaatactccatcaagaaaaataggtaaaaaatct
attgatataataaaaaaagaatcatctttaacaaacaaatcttattgggatgttattaat
tacttagtatataatgataagtataaattacatacaaaaaaattaaaaaattttatagat
ataataaacaatttagataaaattatattagatataccattacataaaaaaatacacaaa
atattagaatatacaaaattatttgatttatataaaaaggataattttaattcttctaaa
ttagataatttaaatgaattaataaattcagcatatagatttgaaaaaaaaaatatatat
aataaaaatatattagaagaatttatatctaacatgataattcaatatgaagatactaat
attagtaatattgaaaataaagttaaacttatgacaatacattcttctaaaggtttagaa
tttaaatgtgtatttataataggtatggaagaaggcattttcccatctaataagtcaata
gataattcaaatattgaagaagaaagaagattagcatatgttggtataacaagagctatg
aaaaatttaatattaacttattctaaattcagattaaattgcggtaaattaataacaaat
aaaccatcaagatttatatatgaaattccaattgaatgtattaaagtattaaattaa
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