Exaiptasia diaphana (Aiptasia): 110251821
Help
Entry
110251821 CDS
T05080
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
epa04040
]
110251821
Ion channels [BR:
epa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110251821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
110251821
NCBI-ProteinID:
XP_020914226
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MCDSRFSQLFTDEERNALAKNEGSQRPQNVSVLSSIKVRFSPQMKHCSRGTVVPAESSAL
RLRRSISNTVERKPTENIGLHQACKDDMIDVVQELLVNGSCDINELDAAGFAPLHFAAKY
DYDDIAKLLLNHGADPDIHNACLRTSTPLQLACWFDSSETVHVLIDNDADVSAGARYGQL
AIHCAAARSGTTILEELLLKGKANPNNKDNSGFTPLHIAANTGRVEIVNVLLRYGANIML
QDNDGNTPAHIAAREGHVTTLTALLQAANSSGVSMRYILDSTGTGSCLQLAVKRSHVQAA
AVCLQYGASTYSNQHDTSPPLHTACIHGNIELVKLLVVSGASIQADDIEGMTPILRAALA
GHVDVVNYLIDQGASLEAAGPLEPSPLMCAVKRGHAAVIRLLLTRGSSIDVRDSSNRTCL
HVAVYSENEETLDVLLKHGCKTLVNNQDKSEFTPLHFAAINQNLKMILRLLEFGADTTIC
DEEEKLPLHHAAEAGDLXCVKALVEANRQSIHATDYRLRTPLYYAALENKNDVVKFLIQN
GARVNSRDDDRLTPLLAIAPGGCHKAAIMLLDHGAKIDDLSKNRATALNVACAHGNVAVV
KVLLDRGAAVDIKSAFGRGCLGAAIYGGKAQSCMEIIKHKRWKEALNVKDSKGFSSMKGL
IENFPEVAKLVMDKCVVTSSNVTTTDPDYSITYNFEFLDVHPXERNGKRGAHFYFGPQTM
MESGASRELLFHPLTTELLNLKWNSIAKYLTASGLFMFALFVANFTLFMLCFGQQDYKKG
KKLFKDEYFLCTPQNLSWQSYGVAAFTGMWLFSHVYRFFKERGMYFDRYVAMEVSTLVAC
LMSSFLGEWITDKRNQFGWGILALLLCYFSVLFYIQTIFHSGIYVTMLFGVLKTLVKAMI
TFVILLFVFAILFHLLLNSPFYEGKKIFVGEGVYNQTKVEIPHPFGNIFLSFVKVIAMMI
GELEFTRFFVEQKYDYNIEPLAIFVFLAFCAFLPIVLMNLLIGLAVGDIDSVQKNAEIKL
QAIKIEEIYSLEQKIPVAILRYFYKPYIVKYPNRKSKGIVQTLKAVGNQIVGNTEDYDDI
LEDQEREDMETMEGAMSSLTKRMNQQNNRIDELLDDVQQQRLTLDKLSNLMIQRKERAEK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgactcacggttttcccagctgtttaccgatgaagagaggaatgcactggctaaa
aatgaaggcagtcagcggccgcaaaatgtttctgtgttatcatctattaaagtgagattt
tctccacagatgaagcactgttcgcgcggtacagttgtaccggcagagtcttcagcattg
agattaaggcgaagtatctcgaatactgtagaacgaaaacccacagaaaatatcgggctt
catcaggcatgtaaagatgatatgatcgatgtcgttcaagagttattggtcaatgggtca
tgtgacatcaatgaacttgacgcagctggttttgcacctcttcactttgctgctaaatac
gactatgatgacatagcaaaattactgctcaaccatggtgcagacccagatatccacaat
gcctgcttacgaacctcaacacccctccagctcgcctgttggttcgactcgtcagaaact
gtgcatgttcttattgataatgacgctgatgtgtccgctggcgcaaggtatggtcaactg
gctatccactgcgcggctgcaaggagtggaacgactattttagaggaattacttttaaaa
ggaaaggcaaaccctaataataaggacaattcaggattcactccccttcacattgcagca
aatacgggtcgggtcgaaattgtaaacgtcttgttgagatacggtgccaacatcatgctt
cargacaatgatggcaatacgcctgcrcatatcgcagcacgtgaaggtcacgtgactacc
ttgacggcattgctgcaagcagccaattcatcaggagtgtcaatgaggtacattctcgac
agtacaggaactgggtcttgtcttcagctggctgttaaaagatcgcatgtacaggcagcc
gcagtttgtcttcaatatggagcaagyacatacagtaaccagcacgacaccagtccccct
ctgcacacagcatgtattcatggtaacatagagctcgttaaactcttggtagtgagtggt
gcgtcaattcaggcggacgacattgaagggatgacacctattttaagagctgccctggca
ggtcacgtggacgtggtcaactacttaatcgatcagggagcaagcttagaggcagcaggt
ccactagagcctagtccactcatgtgcgcggtcaaaagaggacatgctgccgtcataagg
ctgttattgacacgtggttcatcgattgacgtcagagattcaagcaacaggacgtgttta
catgttgctgtttacagtgagaatgaggaaacgctggacgtgttgcttaagcatggctgt
aagactttggttaacaatcaagataaatccgagttcactcctttacattttgctgccatc
aatcaaaatcttaagatgatccttagactactggagtttggagcagacacgactatctgy
gacgaagaagaaaagcttcctttgcaccacgctgcagaggcaggagaccttmaatgtgta
aaggcactggtagaagcaaatagacagtcaattcacgccacagattacagacttcgcacg
cctctatattacgctgctctagaaaacaaaaacgacgtcgtcaagtttctaattcaaaat
ggagctcgagtaaactcaagggatgacgatcgcttaactcctcttcttgctatcgctcct
gggggatgtcataaagcagctatcatgttactagaccacggtgctaaaatagatgacctt
agcaagaacagagccactgctttgaacgttgcgtgtgcccatggtaacgtagcagtcgtt
aaagtcctgcttgatagaggagctgctgtcgacattaagtcagctttcggtcgaggctgc
ttgggcgccgctatctatggtggaaaagcacaatcttgtatggagataataaaacataaa
agatggaaagaagctcttaacgttaaagattcaaaaggattttcttcgatgaagggtttg
attgagaacttccctgaagtagccaagttagtcatggataaatgcgttgtaacatcgagt
aatgtgacaacaacagatcctgactattcgattacctacaattttgaattcctggacgtt
cacccgtmtgaaagraatggtaaacgtggtgcacatttctactttggaccacagaccatg
atggaaagtggggcatcgagagagcttcttttccatccactgactacagaattattgaac
ttgaaatggaattctatagccaagtacttgacagcgagtggactgtttatgtttgctttg
tttgtggccaattttactttattcatgttgtgttttggacaacaagactacaaaaaagga
aaaaagctctttaaagacgaatatttcctttgtacrccccaaaatctgtcatggcaatct
tatggggtagctgccttcactggtatgtggcttttttcacacgtttatcgcttctttaaa
gagagggggatgtacttcgacaggtatgttgctatggaggtttctacccttgttgcttgt
ttgatgtcatccttccttggcgaatggattacggataaacgaaatcaatttggytggggt
attttggctcttcttctttgctacttttcggttctattytacattcaaacgatatttcat
tctgggatctatgtaactatgttatttggagtcttgaaaactcttgtcaaggctatgatc
acttttgttatycttctgttcgtgtttgctatcctgtttcatttgcttcttaattctcct
ttttatgagggaaaaaagattttcgtcggagagggtgtttataaccaaactaaagttgaa
attccacatccgtttggaaacatctttctgtcatttgtaaaagttatagcaatgatgatt
ggtgagctggaatttaccaggttttttgtmgagcagaaatacgattacaacattgaacct
ttagctatctttgtcttcttggctttttgtgctttcttaccgattgtcctaatgaattta
ttaattggactagcagtcggtgatatcgatagcgtacaaaagaacgctgaaattaagcta
caagccattaagattgaggaaatctattcgttggagcaaaagataccagtagctattctt
cgatatttctacaaaccatacatagtwaagtacccgaacaggaaatcaaaaggaattgtt
cagaccttgaaggctgtagggaatcaaatagttgggaatactgaggattacgatgacata
cttgaggatcaagagcgggaagatatggagacaatggaaggtgccatgagtagtctcacc
aagagaatgaaccagcaaaacaacaggatagatgaacttctcgatgacgttcaacaacag
cgtttaacactggacaaactatcaaaccttatgatacaaagaaaagaacgcgccgaaaaa
taa
DBGET
integrated database retrieval system
