KEGG   Exaiptasia diaphana (Aiptasia): 110252702
Entry
110252702         CDS       T05080                                 
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa04512  ECM-receptor interaction
epa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:epa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110252702
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110252702
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:epa00535]
    110252702
Proteoglycans [BR:epa00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   110252702
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 110252702
NCBI-ProteinID: XP_020915199
UniProt: A0A913Y4Y5
LinkDB
Position
Unknown
AA seq 660 aa
MWWIRVQLSKPSQRVLVAVFLVIANFFIADVAGQTIAKDLAEVFGWRDTEPSSAPLQXVF
SHSLVLPEYFKDNETSREFSLLFTLNSKVVKNLNLSVSAESYNDSVVLFDLLLQNGRVTV
RHDGIXLQDIKPEFLFQGWQKFVVIYRGLELLLHDCNTVVRIPFPEGKAELPSWRDLKVV
TSPNLPTKEDIRENVCEMTLMIGSNGVSEHCAKTYPICPKGPEIIVPTPTSVLPTNRVID
PDYAVQMKGPPGNKGPRGDPGRNGGPGRPGHPGRDGPKGTKGLKGLFGEKGEKGYKGVRG
PIGPPGEMGTPGLKGFAGFAGHQGLQGKRGNRGLIGPQGLPGMMGIQGLHGIEGIQGESG
QFGEEGAIGEKGFPGETGGMGLIGSPGKPGEQGRPGPRGVVGHVGERGPRGSPGILGIKG
IKGETGSSGWTGHKGSKGEPGRKGVKEETGDKGSMGXPGPPGGKGKRGPRGPRGVDGDGG
IMGVQGVPGKKGVPGQPGIPGMPGASGARGLPGIEGNAGLVGMKGQEGDTGSPGQKGPEG
LEGRFGKKGDPGYNGLDGFKGSIGXQGLPGERGRLGPTGVKGAEGDPGSRGHYGPLGING
TQGPQGEPGAMGVQGKPGDQGRLGIVGIPGPKGIEGILGKPGLTGGVVCTISVYCHGAEY
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgtggtggattagggtccagctatccaagcccagccagagggtccttgtagctgtattc
cttgtgattgccaatttcttcattgctgacgttgctggtcaaacaattgcaaaagacctt
gctgaagtatttggatggagagatacagaaccaagttctgcacctttgcaamgtgtgttt
tctcattctttagttcttcctgaatatttcaaagacaatgaaaccagccgtgagttctct
cttctctttacactcaattctaaagtggtcaaaaacttgaacctcagtgtgtcagcggag
tcttataatgattctgtggtgctattcgacctactactgcaaaatggacgagtcacagtc
agacatgacggcattsttctccaggacatcaaaccggaatttctttttcaaggctggcaa
aaatttgttgtgatatatagaggcctagaacttttacttcatgactgtaacaccgtcgtt
agaataccatttcctgaaggaaaagcggagctgccgtcatggagagaccttaaagtagtt
acatccccaaaccttccgacgaaagaagatatcagagaaaatgtatgcgagatgaccctt
atgatcggatcaaatggagtatcagaacactgtgccaagacgtacccaatatgccctaaa
ggacctgaaatcattgtaccgacccctacctctgtattgccaacaaacagagtcatagat
cccgactacgctgttcagatgaagggaccgccaggaaataagggacctagaggagatcct
ggtcggaatggagggcctggaagacctggtcacccgggccgcgatggcccaaagggcaca
aaaggacttaaaggactgtttggagaaaagggtgagaaaggatataaaggagttcgcggt
cccatcggcccaccaggtgagatgggtacacctggtttaaaaggattcgctggttttgct
ggtcaccaaggtcttcaaggcaaacgtggaaatcgtggcctcattggacctcagggtctt
cctggaatgatgggtattcaaggattacatggtattgaaggaattcagggcgaatctgga
cagtttggtgaagaaggagcgataggggaaaagggctttcctggagagacaggcggcatg
ggtcttattggtagtcccggaaaacctggagaacaaggtcgacccggcccgagaggygtt
gtcggccacgtgggtgaacgtggtccaagaggatctcctggcatacttggcatcaaagga
attaaaggagaaaccggcagtagtggatggactggtcataaaggatctaagggcgagcct
ggacgtaaaggcgtaaaggaggagaccggtgataaaggcagcatgggtrcaccaggacct
cctggaggaaaaggaaagagaggaccgcgagggccaaggggtgtcgatggtgacggtggt
attatgggtgttcaaggtgttccgggtaaaaagggtgttccwggacaaccaggtatacca
ggcatgcctggggcaagtggtgccagaggtcttcccggyattgaaggaaacgctggtcta
gttggcatgaaagggcaggagggtgatactggtagtcctggtcagaagggtcccgaaggt
cttgaaggtcgatttggaaagaaaggcgatccaggatataatggtctagatggtttcaag
ggcagtattggargwcaaggattgcctggagaacgtggaagactgggcccaacaggtgtg
aagggagccgaaggtgaccctggaagtcgtggccactatggaccgcttggtatcaatggt
actcaaggtccgcaaggagagcctggagctatgggagtgcaaggtaaacctggtgatcag
ggacgtttgggtatagttggaattccaggtccaaaaggcatcgaggggattcttggcaag
cctggattaacaggtggagtggtatgtaccatttccgtgtattgtcatggtgctgagtac
tga

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