Exaiptasia diaphana (Aiptasia): 110252702
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Entry
110252702 CDS
T05080
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa04512
ECM-receptor interaction
epa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110252702
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110252702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
epa00535
]
110252702
Proteoglycans [BR:
epa00535
]
Extracellular matrix (ECM) proteoglycans
Others
110252702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110252702
NCBI-ProteinID:
XP_020915199
UniProt:
A0A913Y4Y5
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MWWIRVQLSKPSQRVLVAVFLVIANFFIADVAGQTIAKDLAEVFGWRDTEPSSAPLQXVF
SHSLVLPEYFKDNETSREFSLLFTLNSKVVKNLNLSVSAESYNDSVVLFDLLLQNGRVTV
RHDGIXLQDIKPEFLFQGWQKFVVIYRGLELLLHDCNTVVRIPFPEGKAELPSWRDLKVV
TSPNLPTKEDIRENVCEMTLMIGSNGVSEHCAKTYPICPKGPEIIVPTPTSVLPTNRVID
PDYAVQMKGPPGNKGPRGDPGRNGGPGRPGHPGRDGPKGTKGLKGLFGEKGEKGYKGVRG
PIGPPGEMGTPGLKGFAGFAGHQGLQGKRGNRGLIGPQGLPGMMGIQGLHGIEGIQGESG
QFGEEGAIGEKGFPGETGGMGLIGSPGKPGEQGRPGPRGVVGHVGERGPRGSPGILGIKG
IKGETGSSGWTGHKGSKGEPGRKGVKEETGDKGSMGXPGPPGGKGKRGPRGPRGVDGDGG
IMGVQGVPGKKGVPGQPGIPGMPGASGARGLPGIEGNAGLVGMKGQEGDTGSPGQKGPEG
LEGRFGKKGDPGYNGLDGFKGSIGXQGLPGERGRLGPTGVKGAEGDPGSRGHYGPLGING
TQGPQGEPGAMGVQGKPGDQGRLGIVGIPGPKGIEGILGKPGLTGGVVCTISVYCHGAEY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggattagggtccagctatccaagcccagccagagggtccttgtagctgtattc
cttgtgattgccaatttcttcattgctgacgttgctggtcaaacaattgcaaaagacctt
gctgaagtatttggatggagagatacagaaccaagttctgcacctttgcaamgtgtgttt
tctcattctttagttcttcctgaatatttcaaagacaatgaaaccagccgtgagttctct
cttctctttacactcaattctaaagtggtcaaaaacttgaacctcagtgtgtcagcggag
tcttataatgattctgtggtgctattcgacctactactgcaaaatggacgagtcacagtc
agacatgacggcattsttctccaggacatcaaaccggaatttctttttcaaggctggcaa
aaatttgttgtgatatatagaggcctagaacttttacttcatgactgtaacaccgtcgtt
agaataccatttcctgaaggaaaagcggagctgccgtcatggagagaccttaaagtagtt
acatccccaaaccttccgacgaaagaagatatcagagaaaatgtatgcgagatgaccctt
atgatcggatcaaatggagtatcagaacactgtgccaagacgtacccaatatgccctaaa
ggacctgaaatcattgtaccgacccctacctctgtattgccaacaaacagagtcatagat
cccgactacgctgttcagatgaagggaccgccaggaaataagggacctagaggagatcct
ggtcggaatggagggcctggaagacctggtcacccgggccgcgatggcccaaagggcaca
aaaggacttaaaggactgtttggagaaaagggtgagaaaggatataaaggagttcgcggt
cccatcggcccaccaggtgagatgggtacacctggtttaaaaggattcgctggttttgct
ggtcaccaaggtcttcaaggcaaacgtggaaatcgtggcctcattggacctcagggtctt
cctggaatgatgggtattcaaggattacatggtattgaaggaattcagggcgaatctgga
cagtttggtgaagaaggagcgataggggaaaagggctttcctggagagacaggcggcatg
ggtcttattggtagtcccggaaaacctggagaacaaggtcgacccggcccgagaggygtt
gtcggccacgtgggtgaacgtggtccaagaggatctcctggcatacttggcatcaaagga
attaaaggagaaaccggcagtagtggatggactggtcataaaggatctaagggcgagcct
ggacgtaaaggcgtaaaggaggagaccggtgataaaggcagcatgggtrcaccaggacct
cctggaggaaaaggaaagagaggaccgcgagggccaaggggtgtcgatggtgacggtggt
attatgggtgttcaaggtgttccgggtaaaaagggtgttccwggacaaccaggtatacca
ggcatgcctggggcaagtggtgccagaggtcttcccggyattgaaggaaacgctggtcta
gttggcatgaaagggcaggagggtgatactggtagtcctggtcagaagggtcccgaaggt
cttgaaggtcgatttggaaagaaaggcgatccaggatataatggtctagatggtttcaag
ggcagtattggargwcaaggattgcctggagaacgtggaagactgggcccaacaggtgtg
aagggagccgaaggtgaccctggaagtcgtggccactatggaccgcttggtatcaatggt
actcaaggtccgcaaggagagcctggagctatgggagtgcaaggtaaacctggtgatcag
ggacgtttgggtatagttggaattccaggtccaaaaggcatcgaggggattcttggcaag
cctggattaacaggtggagtggtatgtaccatttccgtgtattgtcatggtgctgagtac
tga
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