KEGG   Endomicrobium proavitum: Epro_1289
Entry
Epro_1289         CDS       T03965                                 
Symbol
rpoB
Name
(GenBank) RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
epo  Endomicrobium proavitum
Pathway
epo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:epo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Epro_1289 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epo03021]
    Epro_1289 (rpoB)
   03400 DNA repair and recombination proteins [BR:epo03400]
    Epro_1289 (rpoB)
Enzymes [BR:epo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Epro_1289 (rpoB)
Transcription machinery [BR:epo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Epro_1289 (rpoB)
DNA repair and recombination proteins [BR:epo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Epro_1289 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AKL98665
UniProt: A0A0G3WL94
LinkDB
Position
1535469..1539224
AA seq 1251 aa
MNKINFGKIGAPIDPPLLLKMQKDSFAGFLQKDVAAEKRKPQGLEGAFKDIFPLTNSDES
LVLEYVSYAFGEPKYSVEESIARDATYALPLKVKLRLMHKKEDGKEKELSEQEVYFGDVP
LMTDTATFIINGAERVVVSQIHRSPGVIFEEDEEKRVTVLGKPLYFARMIPYRGAWVEFE
FDQNGIVYVRIDRKRKIYATTFLRSLGFESDDEILNLFRESKEVSLDAPSAALANEYVAE
DIFDKSTGEIIVDAGKELKEELVKKLQEKGFTSVAVLKDASILITLKKDPIKSQKEAVNH
IYKVLKTQEFIMQERAQGFLEELLFKSVRRYDLTTVGRYKILKKFGPVFEYFSKNFNLNI
PADNKRTLTREDVVVTLKYLLALYNGETEFTEGKQTIKIGLDDIDHLGNRRVRSVGELLE
NQIRIGLVQMARLVKEHMNNQDKTNVTPRSLVNITQFVAQIRKFFGTSQLSQFMDQINPL
AELTHKRRLSALGPGGLNRKRAGFEVRDVHHTHYGRVCPIETPEGPNIGLITSLATFARV
NPYGLIETPYKKVEDGKATDKVDYLTADKEDEFFVAQANTPLDNKGNIVSDSVHGRRFDS
FVFQPPTKVDYMDISPMQVISVSAGLIPFLEHDDANRALMGCNMQRQGVPLLKTEVPLVS
TGIEEKVARDSGVVIISKSDGEVVSVSADEIMIASKSGEIEVYNLRKYGRSNQDTCIDQT
PLVVLGDVVKKGQVIADGPATKDGQLALGQNLLVAYMPWDGYNFEDAMLLSEKLIQDDRF
TSVHIREFQAEARETKGRPEEITKDIPNVGSEDLLNLDEDGVVKAGSYVQRGDILVGKTA
PKGEQQTTPEERLLRVLFGKKAEDVQDASLRVPPGVSGKVIGVRTFVRLEKLSEKERKKK
QEEIREVYDAAKAKLRKDKKEQLAGANKSESSQIESLYASKEEILKKSYEAEKERLKKGD
ELPVSVNKIVKVYIAAKLKVQVGDKLAGRHGNKGIVARILPVEDMPRLPDGTPVDCVLSP
LAIPSRMNVGQLLEIMLGWAGKELKTQMITPVFDGATEEQIKDYVEKAKAQLFAEKKKSL
AAIGLKGKELDDALAKFAQESLPTSDCKVTLYDGRTGEAFMEKVTVGVMYVMKLNHLVED
KMHARSTGPYSLITRQPLGGKAQFGGQRFGEMEVWAIEGYGAAHILQEFLTVKSDDVEGR
VKMYDSIIRGESISEPGIPESFKVLVNELRALSLNVELLNKETTPKPEEKE
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgaataaaattaattttggcaaaatcggcgcaccgatagatccgccgcttcttttaaag
atgcaaaaagactctttcgcgggatttttacagaaagacgtcgctgcagaaaaaagaaaa
ccgcaagggcttgaaggcgcttttaaagacatatttcctctaacaaactccgacgagagt
ttggtattggaatatgtttcttatgcttttggagaacccaaatattccgttgaagaatcc
atcgccagagacgctacttatgcgcttccgttaaaagttaaacttagattaatgcacaaa
aaagaagacggcaaagagaaagagttgtccgaacaagaagtttacttcggcgacgttcct
ttgatgaccgacaccgctacgtttattattaacggagcggaaagagtcgttgtcagccaa
attcaccgttctccgggcgtaatttttgaagaagacgaagaaaaaagagttaccgtttta
ggcaaacctctctactttgcaagaatgattccttacagaggcgcatgggtagagtttgaa
tttgaccagaacggaattgtatacgttagaatagaccgcaaaagaaaaatttacgcaacg
acatttttgcgttcgctgggttttgaatccgacgatgaaattttaaatcttttcagagaa
tccaaagaagtttctttagacgctccgtccgccgcgcttgcaaacgaatacgtagcagaa
gatatttttgataaatctaccggcgaaattattgttgacgcaggtaaagagcttaaagaa
gagcttgttaaaaagcttcaggaaaaaggctttacttccgtcgctgttcttaaagacgct
tctattttgataactcttaaaaaagatcctataaaaagccagaaagaagccgttaaccat
atttataaagttttaaaaacgcaggaatttataatgcaggaaagagctcagggtttcctt
gaagagcttctttttaaatctgtccgaagatacgatttaaccaccgtcggcagatataaa
attctcaaaaaattcggacctgtttttgaatatttttctaaaaacttcaatctcaatatt
ccggctgacaacaaaagaactcttacaagagaagacgttgtagtaacgcttaaatatctt
ttggctctttacaacggcgaaacggaatttaccgaaggaaagcagacaataaaaatcggt
cttgacgacatagaccatttaggcaacagacgcgttcgctccgtcggagaacttcttgaa
aaccagataagaataggtcttgttcaaatggctcgtcttgtaaaagagcacatgaacaat
caggataaaaccaacgtaactccgcgctcgcttgtaaatattacgcagtttgtcgcgcag
ataagaaaatttttcggaacttcgcagctttcgcaatttatggaccaaataaatcctctt
gcggaacttacgcataagcgcagactttcggcgcttgggcccggaggtcttaacagaaaa
agagcgggctttgaagttcgcgacgttcatcacactcattacggacgagtatgtcctatt
gaaaccccggaaggaccaaacatcggtcttataacttctcttgcaacttttgcaagagta
aacccttacgggcttatagaaacgccttataaaaaagttgaagacggaaaagctacggat
aaagttgattatttaaccgccgacaaagaagacgaattttttgtcgcgcaggcaaacact
cctttggataacaaaggaaatatagtttcggattccgtccacgggcgcagatttgactcg
ttcgtgtttcagcctccgacgaaagttgactacatggatatatcccctatgcaggttatt
tcggtatctgcggggcttattcctttcttggagcacgacgacgccaacagagctttgatg
ggctgcaacatgcagcgtcaaggcgttccgcttttgaagacggaagttccgttggtttct
accggcattgaagaaaaagtagccagagattcaggcgttgtaattatttcaaaatcggac
ggagaagttgtttccgtttctgcggacgaaataatgatagcttccaaatccggcgaaatt
gaagtttacaatttaagaaaatacggacgttccaaccaggatacctgcatagatcaaacg
cctcttgtggttttgggagacgttgtgaaaaaaggtcaggtaattgcggacggtcctgca
acaaaagacggacagcttgctcttgggcaaaatcttctcgtggcttacatgccttgggac
ggatacaactttgaagacgcaatgcttttgtccgaaaaattaattcaggacgacagattt
acttcggttcatataagagaatttcaggcggaagcaagagaaactaaaggccgccccgaa
gagattacaaaagatattccaaacgtgggttccgaagacttgttaaatcttgacgaagac
ggcgttgtaaaagccggctcttacgttcaaagaggcgacattcttgtaggaaaaaccgcg
cccaaaggcgagcaacagacaactcccgaagaaagattgcttagagtgctgttcggcaaa
aaagccgaagacgttcaggacgcttctttaagagttccgccgggagtatccggaaaagtt
ataggcgttagaactttcgtgcgccttgaaaaactttccgaaaaagaaagaaagaaaaaa
caggaagaaatccgcgaagtttacgacgcggcaaaagccaaattgcgcaaagataaaaaa
gagcagcttgccggagcaaataaatccgaaagttctcaaatagaatctctttacgcgtct
aaagaagaaatactaaagaaaagctacgaagccgaaaaggaaagacttaaaaaaggcgac
gagctgccggtttcggtaaataaaatagtaaaagtttacatagccgcaaagttgaaagtt
caggtaggagacaaactcgcgggacgtcacggaaataaaggtattgtggcaagaattttg
cctgttgaagatatgcccagacttcccgacggaacgcctgtggactgcgttctttctcct
cttgcaattccttcgcgtatgaacgtgggacagctgttggaaattatgttgggttgggcg
ggaaaagagcttaaaacccagatgattacccctgtttttgacggcgctaccgaagagcaa
attaaagattacgttgaaaaagcgaaagcccaactgtttgccgaaaagaaaaaatctctt
gcggcaataggtcttaaaggcaaagagcttgacgacgctcttgcaaaatttgcgcaagaa
agtttgcctacaagcgactgtaaagttacgctttacgacggaagaaccggcgaagcgttt
atggaaaaagttacggtaggcgttatgtatgttatgaaacttaaccatttggttgaagat
aaaatgcacgcccgttccacagggccttactctcttatcacaagacagcctctgggcgga
aaagcgcagttcggcggtcagagatttggagaaatggaagtgtgggcaatagaaggttac
ggcgcggcgcatatacttcaggaatttttgacggtaaaatccgacgatgtggaaggaaga
gtgaagatgtatgactcaataataagaggcgaatctatttccgaacccggaattccggaa
tcgtttaaagttttggtaaacgagttgagagctttaagtttaaatgtggaacttttaaac
aaagaaacaacgccaaaacccgaagaaaaagaataa

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