Equus przewalskii (Przewalski's horse): 103554416
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Entry
103554416 CDS
T04644
Symbol
IFIH1
Name
(RefSeq) interferon induced with helicase C domain 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
epz
Equus przewalskii (Przewalski's horse)
Pathway
epz04622
RIG-I-like receptor signaling pathway
epz05161
Hepatitis B
epz05162
Measles
epz05164
Influenza A
epz05168
Herpes simplex virus 1 infection
epz05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
epz00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103554416 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
103554416 (IFIH1)
05171 Coronavirus disease - COVID-19
103554416 (IFIH1)
05164 Influenza A
103554416 (IFIH1)
05162 Measles
103554416 (IFIH1)
05168 Herpes simplex virus 1 infection
103554416 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
epz04054
]
103554416 (IFIH1)
Enzymes [BR:
epz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103554416 (IFIH1)
Pattern recognition receptors [BR:
epz04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103554416 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
CARD
SWI2_SNF2
DUF3638
Motif
Other DBs
NCBI-GeneID:
103554416
NCBI-ProteinID:
XP_008523676
LinkDB
All DBs
Position
Un
AA seq
1022 aa
AA seq
DB search
MANGYSTDKCFRYLISCFRARVKKYIQVEPVLDYLTFLPPEAKEQVQTTAATTGNMQAVE
LLLSTLEKGVWPPGWAREFVEALQRAGSPLAARYMNPELTDLPSPSFESAHDECLQLLNL
LQPTLVDRLLVRDVLDKCVAVDLLTLEDRNRIAAAENNGNESGVRELLKRIVQKENWFST
FLAVLSQTGNDALVQELTGTNCSESSAETENLSQEDGPEVKEPLLLATDQPSPEKDVWDV
ENNALESSYADSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAERA
SPEPELHLRPYQMEVAQPALEGKNVIICLPTGSGKTRVAVYVTKDHLDKKKETSEPGKVI
VLVNKVPLVEQLFRKEFNPFLKKWYRITRLSGDTQLKISFPEVVKSHDVIISTAQILENS
LLNSEKGEDAGVVLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNRLKKENKPVIP
LPQILGLTASPGVGGATKQAKAEEHILKICANLDASVIKTVKENIDQLKDQIKEPCKKFA
IADDTREDPFKDKLVEIMTRIQTFCQMNPMPDFGTQPYEQWAIKMEKKAAKEGNRKDRVC
AEHLRKYNEALQINDTIRMIDAYNHLETFYNDEKEKKFAVLEDDSDESGDNGDEDEVDEK
KHLELEETDSFLMTLFFDNKKKLKKLAENPECENEKLTKLRNTIMEHYTRTEESARGIIF
TKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKIN
LLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVVERE
TVNAFREKMMYKAIDHVQNMKPEEYAHKIWELQMQSIMEKKMKTKRSIAKHYKDNPSLIN
FLCKNCSMLACTGEDIYVIENMHHVNMTPEFKELYIVRENKALKKKFADYQTNGEIICQN
CGQAWGTMMVHKGLDLPCLKIKNFVVVFKSNSPKKQYKKWVELPITFPSLDYSEYCVFSD
ED
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggctattccacagacaagtgtttccgctatctcatctcgtgcttcagggcc
agggtgaaaaagtacatccaggtggagccggtactagactacctgacctttctgcctcca
gaggcgaaggagcaggttcagacgacggccgccaccactgggaacatgcaagcagttgaa
ctgctcctgagcaccttggagaagggcgtctggccccctggctgggctagggaatttgtg
gaggccctgcagcgagcaggcagcccattagccgcccgctacatgaaccctgagctcacc
gacttgccctctccatcctttgagagtgctcatgatgagtgtctccaactgctgaacctc
cttcagcccactctggtggacaggcttctggtgagagatgtcttggacaaatgcgtggcg
gtggatctattgacgcttgaagacagaaatcggattgctgctgccgaaaataatggaaat
gaatcaggtgtaagagagctactgaaaaggatcgtacagaaagaaaactggttttctaca
tttctggctgttctgagtcaaacgggaaatgacgcacttgtccaagagctaacaggcacc
aattgttccgaaagcagtgcagaaactgagaatttatcacaagaagatggtcccgaagtt
aaagagccactgcttctagccacagatcagccgagtccagagaaggatgtctgggacgtg
gagaataatgcattggaatcatcttatgcagattcttctgtagtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagaaagagca
tcccctgagccagaactgcatctcaggccttaccaaatggaagttgcccaaccagccttg
gaggggaagaacgtcattatatgcctccccacagggagcgggaaaaccagggtggctgtt
tacgttaccaaggatcacttggacaagaagaaagaaacatccgaacctggaaaagttata
gtccttgtcaataaggtaccgttagttgaacaactcttccgcaaagagttcaatccgttt
ttgaagaaatggtatcgtattactagattaagcggtgatactcaattgaaaatatcattt
ccagaagttgtcaaatcccatgatgttattatcagtacagctcaaatccttgaaaactct
cttttaaactcagaaaaaggagaagatgctggtgtcgtgttgtcagacttttccctcatc
atcattgatgaatgccatcacaccaacaaagaagcagtctataataacatcatgaggcgt
tatttgaaacagaagttgaaaaacaatcgactcaagaaagaaaacaaaccagtgattccc
ttacctcaaatactgggactaacagcttcacctggtgttggaggagccaccaagcaagcc
aaagctgaagaacacattttaaaaatatgtgccaatcttgatgcctctgtcattaaaact
gtgaaagaaaatattgatcaactcaaagatcaaataaaggagccatgcaaaaagtttgct
atcgcagatgacacgagagaagatccatttaaagacaaacttgtggaaataatgacaagg
attcaaactttttgccaaatgaatccaatgccagattttggaactcaaccctatgaacaa
tgggccattaaaatggaaaaaaaagctgcaaaagaaggaaatcgcaaagaccgtgtttgt
gcagaacatttgagaaagtacaatgaagccctacaaattaatgacacaatccgaatgatt
gatgcatataaccaccttgaaactttctataatgatgagaaagaaaagaagtttgcagtc
ctagaagatgatagtgatgagagtggtgacaatggtgatgaagatgaggttgatgaaaag
aaacatttggaactggaagagacagatagttttctcatgactttattttttgacaacaaa
aaaaagttgaaaaagttggctgaaaacccagaatgtgaaaatgaaaagctgaccaaatta
agaaacaccataatggaacattatacaaggactgaggaatcggcacgaggaataattttc
acaaaaacacgacagagtgcgtatgccctttcccagtggattactgaaaatgaaaagttc
gcagaagtaggagtcaaagcccatcatctgattggagctggacacagcagtgagttcaag
ccaatgacacagaatgaacaaaaagaagtcattagtaaatttcgcacaggaaaaataaat
ctgcttatcgctaccacagtggcagaagaaggtctggatattaaagaatgtaatatcgtt
atccgttacggtctcgtcactaacgaaatagccatggtccaggcccgtggtcgagccaga
gctgatgaaagcacctatgtcctggttgcccacagcggatcaggagttgttgaacgtgag
acagttaatgctttccgagagaaaatgatgtataaagctatagaccatgttcaaaatatg
aaaccagaagagtatgcgcataagatttgggaattacagatgcaaagtataatggaaaag
aaaatgaaaaccaagaggagtatcgcaaagcattacaaggataacccatcattaataaat
ttcctatgcaaaaactgcagtatgctggcctgcactggagaagatatctacgtaattgag
aacatgcaccatgtcaatatgacaccagaattcaaggaactctacattgtgagagaaaac
aaagcactgaaaaagaagtttgcagactatcaaacaaatggtgagattatctgccaaaat
tgtggccaagcttggggaacgatgatggtgcacaaaggcttggatttgccttgtctcaaa
ataaagaattttgtagtggttttcaaaagtaattcaccaaagaaacaatacaaaaagtgg
gtagaattacctatcacatttcccagtcttgactattcagaatattgtgtgtttagtgat
gaggattga
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