Eremothecium cymbalariae: Ecym_8298
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Entry
Ecym_8298 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_8298
03041 Spliceosome [BR:
erc03041
]
Ecym_8298
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_8298
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ecym_8298
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Ecym_8298
mRNA cycle factors
Common to processing body (P body) and stress granule
Ecym_8298
Spliceosome [BR:
erc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Ecym_8298
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Ecym_8298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
11469963
NCBI-ProteinID:
XP_003648394
UniProt:
G8JXK3
LinkDB
All DBs
Position
8:605258..607174
Genome browser
AA seq
638 aa
AA seq
DB search
MSELVNKMENMSMDDAAQKKTAYVPPHARRVKEQGVETSPRTMGNNYNRGGRYGGGSTNG
GGSGYGRYGGNSRGGSWFGSNSKNPKGDRGGGYRPGRWVNGKHAPSWRSEELEIELFGTP
DDPGFQSSGINFDNYDDIPVEASGEEVPEPISEFTSPPLDNLLLENIKMARFTRPTPVQK
YSVPIVALGRDLMACAQTGSGKTGGFLFPVLSQSFGAGPAVVTEESGNNNYYNSRKAYPT
AVVLAPTRELATQIFDEAKKFTYRSWVKPCVVYGGADIRQQLRELEHGCDLIVATPGRLN
DLLERGKISLCNVKYLVLDEADRMLDMGFEPQIRHIVEGCDMPSVENRQTLMFSATFPTD
IQHLAADFLKDYIFLSVGRVGSTSENITQKVLYVEDLDKRSVLLDLLAASDGGLTLVFVE
TKRMADALTDFLIMQNLSATAIHGDRSQAERERALQFFRTARANILVATAVAARGLDIPN
VTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGNKNVVKELIDILQEANQEVPS
FLTQVARESSYGKAPTRGGRGGGYSRGNSTRDFRRHGGGGGSEWGSNSNAGGVSNNRSSS
AWGNNRSGSGWGGNGSEWGNNSGSSWGASKPAGNNSWW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactagttaacaagatggagaacatgagcatggacgatgcagctcaaaaaaag
acggcatatgtgcctcctcatgctagacgcgtgaaagaacaaggtgtcgagacttcacca
agaactatgggtaacaactataacagaggtggtagatatgggggtggtagtactaacggt
ggtggaagtggatatggtaggtacggtggtaatagtcgtgggggtagttggtttgggtca
aactctaagaatccaaagggggacaggggaggagggtataggccaggtaggtgggttaat
gggaagcacgcgcctagttggaggtctgaggagttagagatagagttgtttggtactcca
gatgatcctgggtttcaatcttcgggaattaactttgataattacgatgatattcctgtt
gaggcttctggagaggaagttccggaaccaatcagcgagtttacttctcctcctttggac
aatttgttgctggagaacattaagatggcgcgtttcacacgtcccacgccggttcagaaa
tactctgttcctattgttgctttgggaagagatttgatggcttgtgctcaaacgggttct
ggtaagacgggtggtttcttatttcctgttctttcgcagtcttttggtgcgggtccagcg
gttgttaccgaggaaagcgggaacaacaactactataacagcagaaaggcataccctact
gcagttgtgcttgcgcctaccagagagttggctacacagatttttgacgaggccaagaag
tttacttacaggtcttgggtgaagccatgtgttgtttacggtggtgctgacatccgccag
cagttgagggagcttgaacacggctgtgatttgattgttgctactcctggtcgtttaaac
gatttattggagcgtggtaaaatttccttgtgcaacgtcaaatatctagttcttgatgaa
gcagacagaatgttggatatgggtttcgaaccccaaattagacatattgttgaaggttgt
gatatgccaagtgtcgagaacagacaaacgttgatgttttccgctactttccctactgat
atccaacacttggctgctgacttcttgaaggactatatctttttatccgttggtagagtt
ggttctacttctgaaaacatcacacagaaggtgttgtatgttgaggacctagacaagaga
tctgtcctattggatttgttggctgcctctgatggcggcttgactttggttttcgtggaa
accaaaagaatggcggacgccttgaccgattttttgatcatgcagaacttgtcggcaacg
gcaattcacggtgatcgtagtcaggctgaacgtgagcgcgctttgcagttctttagaacc
gcacgtgctaatattttggttgccactgctgttgcagcaagaggtttggatatccctaac
gttacacatgttatcaactatgatttgccttccgatattgatgactatgttcacagaatt
ggtagaaccggtcgtgccggtaacactggtttagctacggctttcttcaaccgtggcaac
aaaaacgttgtaaaggaattgattgatattctacaagaagcaaaccaagaagttccaagc
ttcttgactcaagttgcgagagagtcgtcctacggaaaggctcctacaagaggtggtcgc
ggaggtggttattcccgcggtaacagcactagggatttccgtcgtcatggcggtggtggc
ggctctgagtggggaagcaacagcaacgcaggtggtgtcagcaacaacagatccagttct
gcttggggcaacaacagatcgggctctggttggggcggcaatggttccgagtggggcaat
aattctggttcctcatggggtgcttcaaagcctgccggcaacaactcatggtggtga
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