Erysipelothrix rhusiopathiae Fujisawa: ERH_0533
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Entry
ERH_0533 CDS
T01525
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
erh
Erysipelothrix rhusiopathiae Fujisawa
Pathway
erh03410
Base excision repair
erh03430
Mismatch repair
erh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERH_0533 (recJ)
03430 Mismatch repair
ERH_0533 (recJ)
03440 Homologous recombination
ERH_0533 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erh03400
]
ERH_0533 (recJ)
DNA repair and recombination proteins [BR:
erh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ERH_0533 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ERH_0533 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ERH_0533 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
TPM_phosphatase
Motif
Other DBs
NCBI-ProteinID:
BAK31590
LinkDB
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Position
577208..578749
Genome browser
AA seq
513 aa
AA seq
DB search
MNDMFNSLSPLVQETLKSMDLSDIQLLELFEPTDHVVSNEAIDSMIRFYQTATKLIVCGD
YDCDGVSSTSIAVLLAKKCKIEVGYYIPNRLKEGYGVSKDTITMAHERGYKDVLIIDNGV
KAHEEIAYAKFLGMQVAVVDHHIIDEPVMADAFLHPDVCSSYEASMCASGLIYCVAETMG
LADEYMLAMACTATVADVMPLWGKNREIVRKGIHALNQNQFLQFDALVKRNRFTHYSAKL
LSFQAIPKINTVGRLGDLANVNTLVQYFTTTDESVITSYAKQLFKLNDYRKEQGKALKEV
AMMQVNDDPIQIIVDKRFHEGLLGIVANQVAQETMKPTLVLTEYDNVLKGSARSMTFSLQ
DIFTEVRSDYFVAMGGHDFAYGMTLNKATFEDFKSDVNQIVSDFGAFEGRHESVLSIDPS
WITQAALEQLRQLEPFGEGFKLPLMSIKIPRDFQLFNLNGYGFKYAFNGFSFDEAVFFTQ
QYQKYQLQTARRLIGTLDLDSRSKNVLFVEDFE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatatgtttaattctttatcaccgcttgtacaagaaaccctgaagtccatggac
ttgtccgatattcagttactggaattgtttgaaccaacagatcatgttgtttcaaatgaa
gccattgactcgatgattcgtttttatcaaacagccacaaaattaattgtatgtggtgat
tatgattgtgatggtgtttcttcaacaagcattgcggtgttgttagcgaaaaaatgtaag
attgaagttggatattatattccaaatcgtcttaaagaaggttatggtgtttcgaaagat
accatcaccatggcccatgaacgtgggtataaagatgttttaattattgataacggtgtt
aaagcacacgaggaaattgcttatgcgaagtttttaggtatgcaagtagctgttgtagat
catcatattattgatgaacccgtaatggctgatgcgtttttacatcccgatgtttgcagt
tcttatgaagcatcgatgtgtgcaagtggtttaatttattgtgttgcggaaacaatgggt
ctagcggatgagtatatgcttgcgatggcatgtaccgcaacggttgcggatgtgatgccg
ttatggggtaaaaaccgagaaatcgttcgaaaagggattcatgctttaaatcaaaatcag
ttcttacaatttgacgcactagttaagcgtaatcgttttacacattactctgcgaaattg
ctttcgtttcaagcaattccaaaaattaacactgtgggacgattgggtgatcttgcgaat
gtgaatactttagttcaatacttcactacaacggatgaatcggtgataacgtcttacgcc
aaacaattatttaaattaaatgactatcgcaaagagcaaggaaaagcgcttaaagaagtt
gcgatgatgcaggtcaatgatgaccctattcaaattattgttgataaacggttccacgaa
ggcttgttagggatagtagccaatcaagtagctcaggaaaccatgaaaccgaccttagtc
cttacagaatacgataatgtcttaaagggcagtgctcggagtatgacgttttcattacaa
gatatatttacagaagttcgttcagattattttgttgcgatgggcggacatgattttgct
tatggaatgacgcttaataaagcgacgtttgaggattttaaatctgatgtaaaccagatt
gtgtcagattttggtgcttttgaaggacgtcatgagtctgtgctttccattgatccatca
tggatcacacaagctgctcttgaacaattacgtcaacttgagccattcggagaaggcttt
aaattgcccttaatgagtattaaaattcctcgtgatttccagttgtttaaccttaatggt
tatggttttaaatacgcttttaatggtttttcatttgatgaagcagtgttttttacacaa
cagtatcaaaaataccaacttcaaacagcccgacgtttaattggaactttagatttagac
agtcgttcaaaaaatgtattgttcgtagaagattttgaataa
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