Erysipelothrix larvae: AOC36_00025
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Entry
AOC36_00025 CDS
T04263
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
erl
Erysipelothrix larvae
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erl03032
]
AOC36_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
erl03400
]
AOC36_00025 (gyrB)
Enzymes [BR:
erl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AOC36_00025 (gyrB)
DNA replication proteins [BR:
erl03032
]
Prokaryotic type
DNA Topoisomerases
AOC36_00025 (gyrB)
DNA repair and recombination proteins [BR:
erl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOC36_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AMC92434
UniProt:
A0A109UGB8
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All DBs
Position
4309..6234
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AA seq
641 aa
AA seq
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MSNEKVTHSYTSEDIQVLEGLEAVRKRPGMYIGSTSIRGLHHLVWEIVDNAIDEALAGYA
SNITVSVDKENIVTVSDDGRGLPIGIHKKTGVSTAETIFTVLHAGGKFGGGAYKVSGGLH
GVGASVVNALSEYLEVFVHLDGKEYYLRFEDGGKVAIPLKEIGTSDKNGTLVRFKADPTI
FTETIEYSHDVLRDRLRQLAFLNKGIRITFDDEREEDESKRHLVFYYEGGLKEYIAFINK
NKTVLHEDILYGEGEEDGIVVEVSMQYNDSYLSSIYSFCNNINTQEGGTHEDGFRLALTR
VINNYAKENGFLKKDDENFLGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKITSS
VFGDVLERFLMENPDTAKVIMEKAVLAAKARVAARKARELTRRKGALEVSSLPGKLADCS
NRNPEDCEIFIVEGDSAGGSAKLGRDSTYQAILPLRGKVLNVEKARLHRIFENNEIRMML
TAFGTGIGEEFDISKLRYHKIVIMTDADVDGAHIRTLLLTFFYRFVKPLVERGHIYIAQP
PLYKISRGNKMAYAYSEEELDIIKKDFGEKFNIQRYKGLGEMNGEQLWDTTMNPEERILL
QVQVEDAMEADEIFRTLMGDEVAPRRDFIEKNAQFATDIDY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgagaaagtaacacattcttatacatcagaagacattcaggtacttgaaggt
cttgaggcggtacgaaaacgtccagggatgtatattggttcaacgtcaattcgtggtttg
caccatcttgtatgggaaatagttgataatgcaatcgatgaggcattggcaggatatgca
tcgaacattacagtttctgtagataaggaaaatatcgtaaccgtaagtgatgatggccgg
gggcttccaataggaattcataagaagacgggcgtatctactgcggaaacaatttttact
gtgctccatgctggtggtaaatttggtggtggcgcatataaagtgtctggagggcttcac
ggtgttggggcatctgttgttaatgcattatctgaatatttggaagtatttgttcattta
gatggcaaagaatattatcttcgatttgaagatggtggtaaggttgcaattcctttaaag
gaaattggtacttcagataaaaatggaacacttgttcgatttaaagctgatccaacaatc
tttactgaaacaatcgaatattcacacgatgttctacgcgaccgtttacgtcaacttgca
ttcctaaacaaaggcattcgtattacatttgatgatgaacgtgaagaagatgaatcaaaa
cgccatctcgtattttactatgagggtggtcttaaagaatacatcgcattcattaataaa
aataaaacagtacttcatgaagacattctttatggagaaggtgaagaagatggaattgtt
gtggaagtatcaatgcaatataacgatagttacctctcaagcatctactcattctgtaat
aacattaatactcaagaagggggaactcatgaggatggtttccgtttagcccttacgcgt
gttataaataattatgcaaaagaaaatggcttcttaaagaaggatgacgaaaatttctta
ggtgatgatgtgcgtgaaggtcttaccgcaatcatttctgtaaaacaccctgatcctcaa
tatgaaggtcaaacaaagacaaaactcggtaactccgaagttcgaaagattacatcaagc
gtctttggggacgtcttagagcgtttcttaatggaaaacccagatactgctaaggtaatc
atggaaaaggctgtgttggcagcgaaagcgcgtgttgcagcacgtaaggcgcgcgaactc
acacgccgtaaaggtgcacttgaagtttcttcgcttcctggaaaacttgcagactgttca
aatcgtaatccagaagattgcgaaatcttcatcgtcgaaggggactccgctggaggaagt
gctaaattaggacgtgattcaacctatcaagcgattttaccattaaggggtaaagtctta
aacgttgaaaaagcccgcttacatcgtattttcgaaaataatgaaattcgtatgatgctc
actgcctttggtacaggaattggcgaagaatttgatattagtaaacttcgctaccataaa
attgtaattatgaccgatgccgatgtcgatggtgcccatattcgtaccctcttactcaca
ttcttctatcgttttgtgaaaccattggttgaaagaggtcatatttacattgcacaacca
ccgctttataagatttcaagaggaaataagatggcatatgcttattctgaagaagaactt
gatatcatcaagaaagattttggtgaaaaattcaacatccaacgttataaagggcttgga
gaaatgaatggagagcaactttgggatactacgatgaatcctgaagaaagaatcttgctc
caagtacaagttgaagatgctatggaagcagatgaaatatttagaacactgatgggtgat
gaagttgcaccacgtcgcgattttattgagaaaaacgctcaattcgctacagatattgat
tactag
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