Encephalitozoon romaleae: EROM_051160
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Entry
EROM_051160 CDS
T03458
Name
(RefSeq) pre-mRNA cleavage complex GTPase subunit
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EROM_051160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ero03019
]
EROM_051160
Enzymes [BR:
ero01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
EROM_051160
Messenger RNA biogenesis [BR:
ero03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
EROM_051160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
RHH_3
Pirin_C
Motif
Other DBs
NCBI-GeneID:
20521348
NCBI-ProteinID:
XP_009264544
UniProt:
I7ARP2
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All DBs
Position
V:140117..141238
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AA seq
373 aa
AA seq
DB search
MEIRLWPNQEFRIEVNETQKLKVMVVSGLAEVKGQELLNEKWYAFKDTKTFIFTFSGCKL
KVEGACDLQYVSDTTNVPLIFNILSFFSKNGFDYSKLRTFMVIGNGRSTFCFTLINFFVR
MGKKVLFTEVDPSRGNIFPGALSTIHVDTLVDCIEGLRLKNPLSFYYGSTEITNMELYDL
QTTKLQEAIKSKGVEDLHLILCPEGTSAFYNTLIKRFEVDRVIVVGNERLYHSLDTIAEK
LMINRSGFVEEKEVGRSISRYFKGVNNEYTPFTFNVKYKWRIVRIGEMYVAPVSALPLGS
TRKVGCVEASEVEIGENSVLGISEAREIEDVAGSPIIGYVVVIDANTFKILCTQPRLPKY
TFLVQGDLKHIEY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgcctttggccaaatcaagagtttagaattgaggtcaatgagacccagaag
ttaaaagtgatggttgtttctgggttggcagaggtcaaaggacaagagttgcttaatgag
aaatggtatgcattcaaggacacaaagacatttatattcacgttttcggggtgcaagctc
aaggttgagggtgcatgcgatcttcaatatgtatctgatacaacaaatgtccccctgata
ttcaacatcctaagcttcttctctaagaatggattcgactatagcaagctcagaacattt
atggttatagggaatggaaggtctacgttttgcttcacattgattaatttctttgtaagg
atgggtaagaaggttttgttcacggaggtggatccatctcgagggaacatattccctggg
gcactaagcacaatccatgtagatacattggtagactgtattgagggactccggctgaag
aatccattgtccttctactatgggtctacagaaataacgaacatggagctatacgacctc
caaacaactaaactacaagaagctataaaatctaagggtgtcgaggatcttcacctgata
ctttgtccagagggtacatctgcattttataacacattaataaagagatttgaggttgat
agggttattgttgtaggaaatgaaagactatatcactccttggacacgatagcagagaag
cttatgataaatagaagcgggtttgtcgaggaaaaggaggtgggaagaagcatttctagg
tacttcaaaggagtcaataacgagtatacaccctttacattcaacgtgaagtacaagtgg
agaattgtaaggataggggagatgtatgttgcgccagttagcgccttaccattaggaagt
acaaggaaggtaggatgcgtggaagcctctgaggtggagattggggagaactcggtgcta
ggaatttctgaagccagggagatagaagatgttgcagggtctccgattattggatatgtg
gttgtgattgatgcaaatacattcaagatactgtgcactcagccgagacttccaaagtat
actttcttggtacaaggggacctcaaacatatcgagtattag
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