Erwinia sp. E602: GKQ23_21145
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Entry
GKQ23_21145 CDS
T10706
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
erwe Erwinia sp. E602
Pathway
erwe02024
Quorum sensing
erwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKQ23_21145 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GKQ23_21145 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erwe03019
]
GKQ23_21145 (hfq)
03036 Chromosome and associated proteins [BR:
erwe03036
]
GKQ23_21145 (hfq)
Messenger RNA biogenesis [BR:
erwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GKQ23_21145 (hfq)
Chromosome and associated proteins [BR:
erwe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GKQ23_21145 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QUG77349
LinkDB
All DBs
Position
complement(4274129..4274440)
Genome browser
AA seq
103 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGSSNYHHGGSNQGGSSQPAQDNDDAE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttgcaagatccgttcttgaacgcactgcgtcgcgaacgtgtt
ccggtttcaatttatttggtcaacggcattaaactgcaggggcagatcgagtcgtttgac
cagtttgttattttgctgaaaaacacggttagccagatggtgtataagcacgcgatctct
accgttgtcccgtcccgtccggtctcccaccacagcaacaatgcgggtggcggaagcagc
aactatcatcacggcggtagcaatcagggtgggtcttcccagcctgcacaagacaatgac
gacgctgagtaa
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