KEGG   Erwinia sp. E602: GKQ23_21145
Entry
GKQ23_21145       CDS       T10706                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
erwe  Erwinia sp. E602
Pathway
erwe02024  Quorum sensing
erwe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:erwe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GKQ23_21145 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GKQ23_21145 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erwe03019]
    GKQ23_21145 (hfq)
   03036 Chromosome and associated proteins [BR:erwe03036]
    GKQ23_21145 (hfq)
Messenger RNA biogenesis [BR:erwe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GKQ23_21145 (hfq)
Chromosome and associated proteins [BR:erwe03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GKQ23_21145 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QUG77349
LinkDB
Position
complement(4274129..4274440)
AA seq 103 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGSSNYHHGGSNQGGSSQPAQDNDDAE
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcttgaacgcactgcgtcgcgaacgtgtt
ccggtttcaatttatttggtcaacggcattaaactgcaggggcagatcgagtcgtttgac
cagtttgttattttgctgaaaaacacggttagccagatggtgtataagcacgcgatctct
accgttgtcccgtcccgtccggtctcccaccacagcaacaatgcgggtggcggaagcagc
aactatcatcacggcggtagcaatcagggtgggtcttcccagcctgcacaagacaatgac
gacgctgagtaa

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