Euwallacea similis: 136408572
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Entry
136408572 CDS
T10684
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
esim Euwallacea similis
Pathway
esim04512
ECM-receptor interaction
esim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136408572
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136408572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
esim00535
]
136408572
Proteoglycans [BR:
esim00535
]
Extracellular matrix (ECM) proteoglycans
Others
136408572
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
136408572
NCBI-ProteinID:
XP_066245737
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Position
4:4011384..4018671
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AA seq
523 aa
AA seq
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MIRVSDIEQKPRFLVALNPRRQSIDFAIQNYEGQLQTLRFNNAKVFDRNWHKIHFGVYRD
RVSLFVDCKDLFEKPLELRGPIDINGNISISKYANSRETVPIDLQWMLMSCDPTKPQREL
CLEIPTDNISEQNPLHPQRVPAPVPSFPSPQPTCNVVCPRGPPGYNGTNGERGFPGPQGL
PGPQGIRGERGEDGRPGYPGPPGLPGISGLSGNGITGPPGLDGLPGIPGPVGSKGEPGIP
GLKGERGFDGLPGLPGPEGKSGPAGEPGPPGEVSTLIDGHYGRVHGPRGVPGVPGVPGER
GSPGEQGPEGPMGMPGFPGKDGNPGTSGASGQRGPPGNPGVAGQPGRSVSESEIREICVA
VLRDELADLSEVLTGPPGPPGSFAPGKPGPPGIPGPSGNPGPPGLPGERGFMGLSGAIGL
PGPAGTPGEKGEKGDRGIEGIGIEGPVGPRGSPGPSGSPGEGLPGRPGERGEPGRSGTPG
HQGVPGPRGPPGYCEYCNGYASDYQQVYAAYVAARNAGNNKGP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatacgagtatcggatatagaacaaaaaccacgatttttagtagctttaaatcccaga
aggcaaagcattgattttgcaattcagaattacgagggacagttgcaaacgttaagattt
aataatgctaaggtatttgacagaaattggcataaaatccattttggtgtatacagagac
agggtttctctatttgttgattgtaaagacctgtttgagaaacccttagagctacgaggt
cccattgatattaatggcaatatttcaatttctaaatatgcaaattcaagggaaactgtt
ccgatcgatttgcaatggatgctaatgagctgtgatccaactaaaccgcaaagagagctg
tgcttagaaattccaacggacaatatttccgaacagaacccattacacccacaaagagta
ccagcacctgtaccatcatttcccagcccgcaaccaacttgcaatgtggtctgtcctcga
gggcctccaggatacaatggcactaatggtgaaagaggattccctggacctcaaggcttg
ccaggtccacaaggcattagaggcgaaaggggtgaggatggaaggcctggttatccagga
cctccaggtttgcctggtattagtggtttgtcagggaatggaattacggggccaccaggg
ctggatggattgccaggaataccgggtccagtagggagcaagggagagcctggcattcca
ggcctaaaaggcgaaagaggtttcgatggtttacctggtttgcccgggcccgaaggaaaa
tctggacctgcaggggagccgggacctcccggggaagtttccactctaattgacggccac
tatggcagagtacacggcccgagaggagtacctggcgttccgggagtcccaggtgaacgc
ggctcgccgggagaacaagggcctgaggggcctatgggcatgccagggtttcccggtaaa
gacggaaatcctggaacttcaggtgcctcagggcagagaggtccaccgggaaatccaggt
gtggcagggcaaccgggaagaagcgtctcggaaagcgaaattcgagaaatatgtgtggct
gttttaagagacgaattggctgatttatcagaagttcttactggacctccagggccacca
gggtctttcgctcctggcaaaccaggaccaccaggaatccctggcccttcaggaaatcca
gggcctccaggtctgccaggggagcggggttttatgggtctctctggagcaattggactt
ccaggtcctgccgggacaccgggtgagaagggagaaaagggggatcgaggaatagaaggg
attggaatcgaagggcctgtaggacctagagggtctccaggtccctcaggaagtccaggc
gaaggtttgcctggaagacctggggagagaggggagccaggaagatctggaactcctggt
catcagggtgtaccaggtcctcgaggacctccaggttattgtgagtattgcaatggttat
gcttcagactatcaacaagtttatgccgcctatgtagcagccaggaacgccggaaataac
aaaggaccatga
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