Euwallacea similis: 136411948
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Entry
136411948 CDS
T10684
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
esim Euwallacea similis
Pathway
esim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136411948 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esim03019
]
136411948 (Not1)
Messenger RNA biogenesis [BR:
esim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136411948 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136411948 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
136411948
NCBI-ProteinID:
XP_066250844
LinkDB
All DBs
Position
11:984589..996995
Genome browser
AA seq
2363 aa
AA seq
DB search
MNLDSLSLALSQIGYLVVTLTKKNHKQVVEELIKIVNLHGLEADRYLFQCLYAAGDFSET
DTRAQVLLDQSCRLLNTPALLTIICYITSPSLVNEKNVKLGPQFFTQFSKCLHLSTVGEV
LFALALKHSSVRDISSVAHTHLRTAVPLLVRAYIDTGGTSRQYEGGLQETTTELLHFILS
SVVEAPKEVGVTNDIHTIFLNTLQRDFPRDQVPVVLAPLVYPEQEELFSEMTSDGSGLSG
ATLDTPLADLVKELGYGFTSSLEECRNTVLKLGGRDIAPSTVARVLAVMCRTHTGLDDSL
GGFKSQDVRCSWNIEIFVQALKEISPSLQWNNVVAELDHPEFVIKDRQGLCILISALRQG
LQSLGFHPDTFPVDHFYKRWANVEGQFSLTQQILKNPDVFCFGDYPCVSVAVDMLKTPPE
HDSKELSNWRSLNLIELLLNVSEFGLYSPVQELFKAPLHSCPDVLLLALLQISGPVTVLR
QELLTNLIPIFLGNHPNSGILLHHAWHTQSLNIKPIIMHAMSEWYTRGDCDQTRLSRILD
VAQDLKALSMLLNAQSAQSYPFIIDLACLASRREYLKLEKWLSDKINEHGEAFISACVKF
LHRRCPQIGKDDPLAKPVPLPVETLTTLILCLQRCITSINISPECQEAILNVINACSMVL
KSRQQSNALMRNRGLDTGLNPSLFATGQIYGHAGVEQQMQGLGTNLSNLTLAGPSNTAFN
LQGGLGPLVQSPGSPSRLLSGGPSNSPFPIIPIQHQGPVGTSSSLVLGVNQISNLGRIGP
AASLEKTRVPDYNTFPEGTSHVSKEIEDEANNYFQRIYNHPPHPTLSIDEVLNMLKRFQD
SPNKREKEVFNCMLRSLFEEYKFFPQYPDKELHITAQLFGGIIERGIVASYVTLGLALRF
VLEALKKPEGSKMYYFGIAALDRFKVRLKEYHKYCEHVRAIAHFGDFPAHLQEYVEYGLQ
SLEPPTKPEGPVLPASLAAMLAPPNTTAISQVYKNTSTVGSTMSTKASTTPASTLGSRPS
IANATNIDTLLVATEKEEQTIAPSEALQDKIAFIFNNLSQLNLKTKCDELRDLITDDFYP
WLSQYLVMKRASIEVNFHNLYNNCLDTLSIHELYKMVVKETFRNIRVLLRSDKAVANFSD
RSLLKNLGHWLGMLALSRNKPILQIELDLKSLLVEAYHKGPQELLYVVPFVAKVLESCAK
SKVFKPPNPWTMALMNVLAELHSEPDLKLTLKFEIEVLCKNLEIDVSQLKPSVYLKDPDR
IRKIEYQLSPPIKKESTLSQSTQSGMISEPELVNILPGQTSSSPAMQNISTTPTSSLQVQ
PEPRFSFSDIQLNGMQALQAHTIISTNALLFQTQPQLKPLAKTAIERAIQEWIAPVLDRS
IKIAIQTCEHIIRKDFALEPDEDRMRLAAHYMVRNLTAGMAMITCRDQLMTSINTHLKQI
LNANLVTPSIQQKEMIDQASSIIATDNMELACAVVQKTAVEKAIPEIDKRLTNEYELRRL
ARKDGRCYCDTLALTYQSERMPEPIRLKVGGLTSSQMAVYEEFGRNIPGFLPNERDTALL
MQNPVLNALDPQPHPATPFPINQLAGDEISLTFEKYIAEVEQFVQLTSGQTQYTLMNSNM
LRIRDCLLHFLRTRDVAMTPPQGLVQKCVESLQDCLVPSLSETDPVVLRFKDLNVKILKT
LQGIFSQQWVIKLVTRYLTECRDEQQRYNIDAVDTLIKSGLVNVSQYDLNLAQCLENGLN
YMGVSFAMQLVEHYLINDRSGQFVAESDLTNTVEVLAKIQTHTRQPPEGLGSIMEILRQS
SHETAFFGDRAPMGPTVHIHTGILQVRAPNYEDPPGLVEKTDYLLREWINIYNSQHQGRD
STKAFSMFVHQMNLHGILKTDDLITRFFRLSTQLCVETVYRALLDKSNPNMSVVRPKCYH
TLDAFVRLVALLVKHSGDTSNTSTKVQLLNKVLGIVAGCLLQDHDTRNVDFHQMPYQRIF
TMLFLELNTPEPVLEAINFQVMTAYCHTFHILRPTKAAGFCYAWLELISHRVFIGRMLGT
TPQQKCWPLYAQLLIDLFKYLAPFLRNAELAKPVTMLYKGTLRVLLVLLHDFPEFLCDYY
YGFCDVIPPNCIQMRNLILSAFPRTMRLPDPFIPNLKVDMLPEISYAPRILTNISQMITP
AQFKKDLDSYLKARAPVTFLSELRSNLQVSNEPGIRYNISLMNALVLYVGTQAIAHIRNK
GHSPSMSTIAHSAHMDIFQNLTVDLDTEGRYLFFNAMANQLRYPNSHTHYFSCTFLYLFA
EANTEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWQHQFVHCAPEIEKLF
ESVARSCFVKTSVQLQQEAEIQE
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgattcgttgtctcttgccttgtcacaaatcggttatttagttgtaacttta
acgaaaaagaaccacaagcaagtagttgaagaacttattaagattgtaaacttgcatggt
cttgaggcagatcgatacctattccagtgcctgtacgctgctggtgatttcagtgaaaca
gataccagggcccaagtacttttagaccaaagttgccggttactcaatactcctgcatta
ttaacaatcatctgctacattactagtccttctttggttaatgaaaagaacgtcaaacta
ggacctcaattcttcacgcagtttagcaagtgccttcatttatctactgtgggcgaagta
cttttcgcgctagctttaaagcattcatctgtacgtgatatttctagcgttgcacacact
catcttcgcactgcagttcctttgttagttcgtgcctatatagatacaggcggcaccagt
cgacaatacgaagggggactccaagaaacaactaccgaactacttcatttcatcctatcc
tcagtagtagaagctccaaaagaggttggagtaactaacgatattcacacgatctttcta
aatacattacaaagagattttccgagggatcaagtccctgtggtgctagctcccttagtt
tatcctgagcaagaagaactcttttcagaaatgacttcagacggttcaggattatctggc
gcaactttggacactcctttagccgatttagtgaaagagctaggatatgggtttacgtcg
tcgcttgaagaatgtcgtaatacagtcctgaagctcggtggcagggacatagctccatct
accgttgctcgagttttagcggtaatgtgccgaactcacaccggattagacgattcttta
gggggttttaaaagtcaggacgtccggtgttcatggaatatcgagatattcgtacaggca
ctcaaagaaatctcgccatccctgcagtggaacaacgtcgtggccgaactcgatcatccg
gagtttgtcatcaaggaccgtcaaggactatgtattttgattagcgccctgaggcagggt
ttgcagtctttaggatttcatccagacacttttccagtggaccatttttataagcggtgg
gctaacgtggaaggacagttcagtctcactcagcaaattttgaagaacccagatgttttt
tgcttcggcgactatccgtgtgtctcggtagctgtggacatgttgaagacacctcccgaa
catgacagcaaggaattatcaaattggcgttcgctcaatttgattgaattgttgcttaac
gtgtccgaattcggactatatagtccggttcaggagttgtttaaggcaccattgcacagt
tgtccagatgtacttttattggccctacttcaaatatccggaccagttacggttttacgc
caagaactactaactaatttaattcccatattcctcggtaatcatcccaattcgggaata
ttgttgcatcacgcctggcacactcaaagtctgaacatcaagcctatcatcatgcatgca
atgtccgaatggtatacccgaggcgattgcgatcaaacacgtttgtcaagaattctggac
gtggcgcaagacctaaaagccctttcgatgttgctgaacgcacaatcggcccagtcttat
ccgtttataatagatctcgcctgtttggcgtcgcgacgcgaatacttaaaacttgaaaaa
tggctttcggacaagataaacgaacacggcgaggctttcatatctgcctgcgtcaagttt
ttgcataggaggtgtccacagattggaaaggacgatccattagccaagcctgtacctctt
cctgttgagactttgacaacgcttattttgtgccttcaacgttgtatcacgagtatcaat
atcagtccagaatgtcaggaagccatcctcaatgtcatcaatgcgtgttccatggtgctg
aaatccaggcagcaaagcaatgccctcatgcgtaacagaggattggacactggtttaaat
ccatccttatttgcaactggacaaatttacggtcatgcaggagttgaacagcaaatgcaa
ggtttggggacgaatttgtctaatttaacattagctggaccaagtaatacagcattcaac
cttcaaggagggttaggtccgttagtacaatcccctggctcaccctcaagattgctaagt
ggtggaccatccaatagtccctttcctattatacctatacaacatcagggccctgttgga
actagttcttccttggtactgggagttaatcaaattagtaatcttgggagaattggtcca
gctgcaagtctcgaaaagacgcgcgtgcctgactataacacttttcctgaaggaacttca
catgtttcaaaggaaattgaggatgaggccaacaactactttcaaagaatctacaaccat
ccaccacatcctaccttgtctattgacgaagttcttaatatgttgaaacgtttccaagac
tctcccaataagagggagaaagaggtgttcaattgtatgctgcgcagcttgttcgaggaa
tataagttctttccgcagtatcctgacaaagaattgcatattaccgcacaactgttcgga
ggcattatagagcgaggaatagtcgcgtcatacgtaactttagggctggcattaagattt
gttctggaagcgttgaagaaacccgaaggctcgaagatgtattattttggcatagccgcc
ttggatcgttttaaggtccgattgaaagagtatcataagtattgcgagcacgtcagagca
atagcacactttggtgacttcccagctcatttgcaagaatatgtggaatacggcctacag
tctttggaaccgccgaccaaaccggaaggtcccgtgttgccggccagtttggcggccatg
ctcgctcctcctaacaccaccgcaatttctcaagtgtacaagaacacaagtaccgtcggc
agcaccatgtccactaaagccagtacaacgcctgcaagtacattgggaagtcgaccgtcc
attgctaacgctacgaatattgacactttactcgtggctaccgaaaaggaagaacaaacc
atagcgccatcggaagctttgcaagacaaaatagctttcatttttaacaacttgagtcag
ttaaatttgaaaacaaagtgcgatgaactcagggatctgataaccgatgatttttacccg
tggttgtcacagtacttagtaatgaagcgagcttctatagaggtgaatttccacaacctc
tataataattgcttagacactctgagtatacatgaactgtataagatggtggtaaaagaa
actttcaggaatatccgagtgttattacgatcggacaaggcagtagccaatttttctgac
agatcgctgctaaaaaatcttggacattggttgggaatgctggcacttagtcgtaacaag
ccgattctgcagatcgagttagatttgaaatcactgcttgtggaggcataccataagggc
ccgcaagaactactctacgtagtgcctttcgtggccaaggtgttggagtcttgtgccaaa
agtaaagtattcaagccaccaaatccttggacgatggcactgatgaacgtgctagcggag
ctccattctgaaccagacttaaaattgactcttaaatttgaaattgaagtgctctgtaaa
aatttggaaattgacgtttcgcaattgaagccgtccgtgtacctgaaagacccagatcga
atcaggaaaattgagtatcagctatctccacctatcaaaaaggagtctactttgtcacag
agtacccagagcggtatgatttccgagccggagttggtcaatattttaccgggacaaaca
agcagttcaccagcaatgcaaaatataagcacaactcctacgtcctcccttcaagtccaa
ccagagccgcgattcagcttcagcgacatccagctaaatggaatgcaagctttacaagct
cacacgattatatctacgaatgcgctgttattccagactcagcctcaattaaaaccacta
gcgaaaacggccattgaacgggctatccaggaatggatcgctcccgttctagaccggtcc
attaagatagctattcaaacttgcgaacatattattagaaaagattttgcgttggagcca
gacgaggatcgcatgcgactggccgcccattacatggtcagaaacctcactgctggtatg
gcgatgatcacctgtcgcgaccaactgatgacttctatcaatactcatctcaagcaaatt
ttaaacgctaacttggtgacaccaagtattcagcagaaagaaatgattgatcaagcatct
agcattatcgctacggataatatggaactagcttgtgcggttgtgcagaaaaccgccgtc
gagaaagccatccctgagatcgacaagcggttaacgaacgaatacgagctaagaaggcta
gcaaggaaagatggcaggtgttactgtgacacgttagctctaacgtaccagtccgaacga
atgcccgaaccaatccgcctaaaggtgggtggcctcacctcgtctcaaatggccgtctat
gaagaattcggccgtaatattcccggatttctccccaacgagcgtgataccgccctcctc
atgcaaaaccctgttctcaacgccctcgatcctcagccgcatccagccacccctttcccc
attaaccaactcgctggtgacgagattagtctgacgttcgaaaaatatatcgccgaagtg
gaacagtttgtacaattaaccagtggccaaacgcaatatactttgatgaacagcaacatg
ctacgcatccgggactgtttattgcacttcctgcgcacaagggatgtagccatgacgcca
ccgcagggtcttgtacagaagtgcgtcgagtcgctacaagactgcctagtaccgtcatta
agcgagactgatcctgtcgtgttgcgattcaaggatcttaacgtgaagatattgaaaacc
ttacaaggaatattcagccaacaatgggttatcaaacttgtgacaagatatttaaccgaa
tgtcgcgacgaacaacaacgttacaatattgacgcagttgacaccttaatcaaatctggt
ctagttaacgtatctcagtacgacctcaacctcgctcagtgtttagaaaacggccttaat
tatatgggagtgagcttcgctatgcaactggtcgaacattacctgatcaatgacagatca
gggcaatttgtggcggaaagcgatttgacaaacaccgttgaagtattggcaaagattcag
acacatactaggcaaccacctgaagggcttgggagcataatggagatattgaggcagagc
agtcacgagaccgctttcttcggagacagagcgccgatgggtcctacagtccatatccat
accggcattttacaggtgcgagcaccgaattacgaagaccctcccggcctcgttgagaaa
acagactacctgcttcgtgaatggatcaacatctataattcgcagcaccaaggccgcgac
tctacaaaagcattcagcatgtttgtgcaccagatgaatttacacggcatcctgaaaaca
gatgatcttataacccgtttctttcgcctctccacgcagctgtgcgttgaaacggtatat
agggccttgttggacaagtccaacccgaacatgtctgtggtcagaccgaaatgctatcac
acgctggatgcttttgtgcgcctcgtcgctctgttagtgaaacattccggagacacgtcg
aacacctccaccaaagttcaattactaaacaaagtattggggatagttgcgggatgtctg
ttacaagatcacgacacaaggaatgtagatttccatcaaatgccttatcagagaattttc
accatgctatttttggaactgaacacaccagagccggttttagaggcaattaatttccaa
gtgatgacggcttattgccacactttccacattttgcggcccaccaaagctgccggattc
tgttacgcctggttggaattgatctcgcaccgagtgtttatagggcgcatgcttggaacc
actccacagcaaaagtgttggccgctttacgcccaattacttattgacttattcaagtat
ttagcaccattcctgcggaatgcagaacttgccaagcctgtcaccatgctttacaaaggc
accctgcgggtgttactggttctcctacacgactttcctgagtttttgtgcgactactac
tacggtttttgcgatgtgattcccccgaattgtatccagatgcggaatctcatactctca
gctttccctcgcaccatgcgtttgcccgatccgttcatccccaatttaaaagtagacatg
ctgcctgagatctcgtacgctccgaggattttgaccaatatttcacagatgatcactccc
gcacaattcaagaaggatttggactcatacttaaaagcgagggcgcccgttacatttttg
tcggagttaagaagcaatttacaggtgtctaatgaaccgggcattagatacaacatctcc
ttaatgaatgctctcgtgctgtacgtcggaacacaggcgatagcgcatataaggaataag
ggtcactctccgagtatgtccacaattgcccatagcgcacatatggatattttccaaaat
ttgacggtcgacctagacactgaaggtcgttatttgttcttcaacgcaatggccaatcag
ttgcgctaccccaacagtcacacgcactatttctcttgcacgtttttgtacttatttgcc
gaagccaacacagaagtaattcaggaacagatcacgcgggtgctgttggagcggttgatt
gtaaataggccacacccgtgggggcttttaatcactttcatcgagctgatcaagaacccg
acgtataaattttggcagcaccagttcgtgcattgtgcgccggagattgaaaaattgttc
gaatcggtcgcccgctcatgttttgtgaagacatcggtgcaactacaacaagaagcagaa
attcaggagtag
DBGET
integrated database retrieval system
