Escherichia coli O104 H4 2009EL-2050 (EAEC): O3M_25035
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Entry
O3M_25035 CDS
T02316
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
esm
Escherichia coli O104:H4 2009EL-2050 (EAEC)
Brite
KEGG Orthology (KO) [BR:
esm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esm03016
]
O3M_25035
03036 Chromosome and associated proteins [BR:
esm03036
]
O3M_25035
Transfer RNA biogenesis [BR:
esm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
O3M_25035
Prokaryotic type
O3M_25035
Chromosome and associated proteins [BR:
esm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
O3M_25035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
HI0933_like
Pyr_redox_2
Thi4
DAO
Pyr_redox
MarR_2
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AFS59651
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All DBs
Position
5206135..5208024
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AA seq
629 aa
AA seq
DB search
MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV
PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatccggatccttttgacgtcatcatcattggcgggggtcatgcaggcaccgag
gccgcgatggccgcggcgcgtatgggtcaacagactctgcttttgacacacaatatcgac
actctggggcagatgagctgcaacccggcgatcggcggtattgggaagggacatctggta
aaagaagtggatgcactcggcggtctgatggcgaaagcgatcgatcaggcgggtatccag
tttaggatactaaacgcaagcaagggaccggcagttcgcgctacccgagctcaggcggat
cgtgtgctctaccgtcaggcggtacgtacggcgctggagaaccaaccgaacctgatgatc
ttccagcaggcggttgaagatcttattgtcgaaaacgatcgcgtggtcggtgctgttacc
caaatggggctgaagttccgtgccaaagccgtcgtgctcaccgttgggacgttcctcgac
ggtaaaattcatatcggtctggataattacagcggtggccgtgctggtgatccgccgtcc
attccgctttctcgccgtttgcgtgaactgccgctgcgcgttggtcgtctgaaaaccggg
acaccaccgcgtattgatgctcgaaccatcgactttagcgtactggcgcaacagcatggc
gataacccaatgccggtattctcgtttatgggcaatgcgtcccagcatccccagcaggtg
ccgtgttatatcactcataccaatgagaaaacccatgatgtgatccgcagtaacctcgat
cgtagcccaatgtacgcaggggtgatcgaaggtgtcggcccacgctactgcccgtcgatc
gaagacaaagtcatgcgcttcgccgacagaaatcagcatcagatcttccttgaaccggaa
gggctgacttctaacgaaatttatccgaacggtatctccaccagcctgccgttcgatgtg
cagatgcaaatcgtccgctccatgcaggggatggaaaacgcgaagatcgtgcgtccgggt
tatgccattgagtatgacttcttcgatccacgcgacctgaaaccgacgctggagagcaag
tttatccaggggctgttctttgctggtcagattaacggcactaccggttacgaagaagcc
gctgcgcaaggtttgctggccggtcttaacgctgcccgtctgtctgctgacaaagaaggt
tgggctccggcgcgttctcaggcgtatctcggcgtactggttgatgacctgtgcacttta
ggaaccaaagaaccgtatcgtatgtttacttcgcgcgcagaatatcgtctgatgctacgc
gaagataatgcggatctgcgtttgactgaaatcggtcgtgaactgggcctggtggatgac
gaacgttgggcgcgctttaacgagaaacttgagaatatcgagcgtgagcgtcagcgtctg
aaatcgacctgggtaaccccgtcggcggaagctgcagccgaagtgaatgctcacctgact
gcgccgctttcccgtgaagccagtggtgaagatctgctgcgtcgtccggaaatgacttat
gaaaaattaaccacgctgacgccgtttgcccctgcgttgacagacgaacaggcggcggaa
caggttgagattcaggttaaatacgaaggttatatcgcgcgccagcaagatgagatcgaa
aagcagctgcgtaacgagaacaccctgctacccgcgacactggattaccgccaggtatcc
ggtctttctaacgaagtgatcgccaaacttaacgatcacaaaccagcctctatcggccag
gcttcgcgtatttctggcgtcacgcctgcggccatctccattctgctggtgtggctgaaa
aaacagggtatgctgcgtcgtagcgcataa
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