Eriocheir sinensis (Chinese mitten crab): 127009722
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Entry
127009722 CDS
T08870
Name
(RefSeq) ATP-dependent RNA helicase me31b-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127009722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
127009722
03036 Chromosome and associated proteins [BR:
esn03036
]
127009722
Enzymes [BR:
esn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127009722
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127009722
mRNA degradation factors
5'-3' decay
Decapping complex
127009722
Chromosome and associated proteins [BR:
esn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127009722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
127009722
NCBI-ProteinID:
XP_050739052
LinkDB
All DBs
Position
41:complement(15321650..15333132)
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AA seq
443 aa
AA seq
DB search
MADMATIPNHTSPIKPMMNNQVVKPVDDKSWKSQLVLPPRDRRKRTSDVTDTKGNEFEDF
CLKRDLLMGIFEKGWERPSPIQEASIPVALSGRDILARAKNGTGKTGAYSIPLLEQIDPT
QSHIQAMVIVPTRELALQTSHICNELAKHIGVKVMVTTGGTNLKDDIMRIYEVVHAVIAT
PGRILDLMEKKVAVMDKCRMLVLDEADKLLSQDFKGMLDRVISYLPPERQILLYSATFPL
TVEQFMKKHLRSPYEINLMDELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCN
STQRVELLAKKITDLGYSCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPIPK
VIDPALYVAEHHFEDDDEGNISK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatggcaaccatccccaaccacacctctcctatcaagcccatgatgaacaac
caagtagtgaagcctgtggatgacaagtcctggaagtcccagctggtgcttcccccgagg
gacagaaggaaacgaacatcagatgtgacagacacaaaaggcaatgagtttgaagacttt
tgtttgaagcgggacttgttaatgggtatcttcgagaaagggtgggagaggccgtcccca
atccaggaggcttccatccctgttgccctcagcggacgagacattctggcccgtgctaag
aatggcacaggaaagaccggggcatactccatcccccttctggagcagattgaccccact
cagagccacatccaagccatggtcattgtacccacacgagaattggctctgcagactagt
catatttgcaatgagttagccaagcatataggagtcaaggtgatggtgaccactggagga
accaacttgaaggacgacatcatgaggatctacgaggtggtgcacgccgtcatcgccacg
cccggccgaatacttgacctgatggagaagaaggtggccgtgatggacaagtgcaggatg
ctggtgctggacgaggctgacaagctgctctcccaggacttcaagggcatgctggacaga
gtcatctcctatctacctcccgagcgacagatcctcttgtactctgccacgttccccctt
acggtggagcagttcatgaagaagcacttgagatctccctacgaaatcaacctgatggat
gagctgaccctcaagggagtgactcagtactatgcatttgtccaagagcggcagaaagtc
cattgtttaaatactttattctcaaagctacaaatcaaccaaagcatcatcttctgcaac
tccacccaaagagttgaactgctggccaagaagatcaccgacttgggctactcctgctac
tacatccacgctaagatggctcaggcccaccgcaaccgtgtcttccacgacttccgtgct
ggactctgcaggaacctggtgtgctcagacttgtttacaagaggtattgacatccaggcc
gtcaatgtggtcataaactttgactttcccaaaatggctgagacctacttacatcggatt
ggcagatcaggacggtttgggcacctgggtattgccatcaacctgataacctacgatgac
cgctttgccctgcaccgcatcgagcaggagctgggcactgagatcaagcccatccccaag
gtcattgacccagccctgtacgtggccgagcatcactttgaagacgatgatgaaggcaac
attagcaagtaa
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