Etheostoma spectabile (orangethroat darter): 116672431
Help
Entry
116672431 CDS
T08457
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116672431 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116672431 (smarcd3)
03036 Chromosome and associated proteins [BR:
esp03036
]
116672431 (smarcd3)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116672431 (smarcd3)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116672431 (smarcd3)
PBAF complex
116672431 (smarcd3)
GBAF(ncBAF) complex
116672431 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
116672431
NCBI-ProteinID:
XP_032360165
LinkDB
All DBs
Position
22:complement(9069476..9104582)
Genome browser
AA seq
520 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQAVQGRARKKPVGFPGANEMPARQMDMREPQSDPT
LGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQ
QKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIEL
DKDLYGPDNHLVESMRGALLFQWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQF
KLDPRLARLLGIHTQARSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFS
EIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQ
EIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEE
ERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gcgcccatgggcccccctggcccaccgtacggtgggagcccggcggtgcgacccggcctg
ccctccccggtgatggagcccagtcgtaagaggcctgcaccctcccagcaggtccagcag
cagcaacagcagcagcaggccgtccagggccgggccagaaagaagccagttggattccct
ggagccaatgagatgccggcgaggcagatggacatgagagagccccaatcagatcccacg
ctcggatcaaatgctaagagaaggaaaatggcagacaagattcttccgcaaaggatccgt
gagctggtccccgagtctcaggcctacatggatctgctggcttttgagcgcaaactggac
cagaccatcatgcgcaaacgtgtggacatccaggaggcgctgaagagaccaatgaagcag
cagaagcgtaaactgaggctttacatatcgaacacgttcaaccctgccagacctgacgct
gatgactcagatggcagcattgcatcatgggaactgcgagtagaggggaagttgctggat
gacccggggaagcagaagaagaagttttcttcattttttaagagcctggtgattgagctg
gacaaagacctctacggtcctgacaaccacctggtggagtcaatgcgtggtgccttgctc
tttcagtggcaccgcacgcccaccactcaggagacggacggcttccaggtgaaaaggccg
ggagacgtgagtgtgcgctgcactctgctgctaatgctggactaccagcctccccagttt
aagctggaccctcgcctggctcgcctgcttggcattcacactcaggctcgctcctgcatc
atccaggccctctggcaatacgtcaagaccaacaagctgcaggactcccatgacaaggag
tacatcaactgtgacaagtatttccaacagatctttgactgccctcggctgaagttctct
gagatccctcagcgcctcaccaacctccttttaccccccgaccccatcgttatcaaccat
gtcatcagtgtggatcccaacgaccagaagaagacggcctgctacgacatcgacgtggag
gtggaagaccccctgaagggtcagatgagcagcttcctcctctccaccgccaaccagcag
gagatcgcctcactcgacaacaagatccatgagaccatcgagtccatcaaccagctgaag
atccagagggacttcatgctcagtttctccagagatcccaagggctacatccaggactgg
cttaaatcccagagccgagaccttaagttaatgacagacgtggtggggaaccctgaagag
gagaggagggcagcgttttaccacgagccttggtcccaggaggcggtcagccgctatttc
tactgcaagatccagcagaggagacaggagttggaacaggccttagctgtccgcaacacc
taa
DBGET
integrated database retrieval system
