Etheostoma spectabile (orangethroat darter): 116690175
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Entry
116690175 CDS
T08457
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116690175 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116690175 (ttc37)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116690175 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_8
TPR_11
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
TPR_15
PknG_TPR
Fis1_TPR_C
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
116690175
NCBI-ProteinID:
XP_032372860
LinkDB
All DBs
Position
5:complement(11584678..11604155)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNIYQKLVELYASSDKNKCYEMIS
KLSEIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSDCINEEEQDNET
QQHLITAFEKAMVLVEPVPGEEHKKLSAAYVKCLSKLPQEEAKTKQACESMLSLFPNQSY
PLEVLGSYYLKTGVLNEDAVSCFSLLLDLAPDNGLGHLGLGTKALQEGRFKDAIKDLAQG
LKKMSSSTGWCSLAEAQFKMQRYSDSAMSCSQGLTVCVCGDKELRVKLLRLKLEALARSG
GEAAADQALETFSQIPDAEKDPALVSLRGRAYLNKGQVDEALKVSSELMASNPNLPQGLV
LRGLAQLAQGQQQLAEESFLKAAGQSPDCGEYYFLLGKLYWDMGVETRKDRSKAHTHFLK
AAKFDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFEMDNDDVESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFREAVAEYLQITAKQDY
VPALKGLGECQLSLAKGLMEDCRDGGAIDLIQQAIQNLFRAVVLRPDLSCLWKLLGDACT
AVSTVSSNRAQVLVPALLAGSDTNTQSQALNQAQTLRVGERCYVRALKMMSEVPSLWYDL
GLNYYRQSSIHRPDEGDQNSQSLLLEKAQQCLKKAIMMDSGANSYWNALGVISMSKDLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAFWVCSTLLDKTNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYMNEHLQLKRQAVQAYKRAVELLQSMSSSEQLAFA
LCSYGRALCTSGQLEEAVRVYNSTPLQELSDLAGLALAYCRAGLIPESINAYERALAVAS
IEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPIAESLLCLCALGLVHSDATLAA
AALTELLKHVSVSGKVTEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWSLLSR
LIPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLANGRHSIENSHRNALKTMQR
AVLLCPDDPAAWAGLMAACHTENTSCYLSGSAPGRQGLEQTLMSVVSEKVHNVEEIERPL
AQTLEGWVLQQAVSGLTLGGQLEQAEALCTQVLNVSPQHPAVMLSLRQVQCQRLLLASGG
TALPDSVLEQLNNAVMMNPTNLGAWHWLAEVYRSQGLLVQAVQAYRQSLQLASQLGLHSS
QVASLLRLALLALEPCLAGVPRKDWTDMILEATTEVLKLGSSPMALLFQALLQYVTKMAA
RETRRLLERLVYSQDFPVTVVQVASWYLLRHLHAKNDQELMNVLLQHAKMNGDQRLLEFH
SLLASPST
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtcaaagcagctctaaagagtgccagagaggccatcaaaaacaaa
gagttcaaagaggctttgaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcagccagtgagctcgagcagccagatcagtcccag
acagcctataaaaaagctgtggagctggagcctgagcagcttctggcatggcagggcttg
gcaaatctttatgaaaaaactgatcagtgggattttaaagttgagctacctaatatctac
cagaagcttgttgagctttatgcaagctctgacaaaaataaatgttatgagatgatcagt
aagctgtcagaaatctatcagtctgaaaaagaatatttaaagttggcaaaggtttggctg
cagctcattcaggtgaaggaggaagaggctgtggataagaaagagctactgcagctatgg
caacagatgacgcaactcctctcagactgcattaatgaggaagagcaggacaatgaaact
caacagcatttaatcacagcatttgaaaaggccatggttctcgtggaacctgttccagga
gaggaacacaagaagctctcagctgcctatgtcaaatgcctttctaaactgccacaagag
gaagctaaaacaaaacaggcttgtgagtccatgctgtccctcttccccaaccaaagttat
cctcttgaagtccttggctcttactacctcaaaacaggtgttttgaatgaggatgcagtt
agctgtttctccctgctcctggatctggcccctgacaacggattgggtcacttgggcctg
ggaaccaaagcactgcaagaaggaaggtttaaagatgccattaaggaccttgcacaaggg
ttaaagaaaatgagctccagcacaggatggtgcagtctggctgaagctcagtttaaaatg
cagagatactcagacagtgcaatgtcatgctcccaaggtctgacagtgtgtgtttgcgga
gacaaggagctgagggtcaaactgctgaggctgaagctagaagctttagccaggagtgga
ggagaagcggctgcagaccaggctttggagacattctcacagatcccggatgcagaaaag
gacccagctctagtttccctgagaggacgtgcataccttaacaagggacaagttgatgaa
gcacttaaggtatcatcagagctgatggcctctaacccgaacctgccccagggcttggta
ctgagaggactggcacaattggcccaggggcagcaacagctggcagaggagagtttccta
aaggcggctggccagagcccagactgtggagagtattatttcttactgggaaaactctac
tgggacatgggagtagagacccgtaaggaccggagcaaagcccacacacattttctcaag
gccgcaaagttcgacccacaccttggttgtgtattccgctacctcggacattattaccgg
gaggtggcaaatgatcatggccgggcacgaggctgctataagaaggcctttgagatggac
aacgatgatgtggagtctggagctgcctccgtggatctcagcatggagcaggacgacatg
gacactgccttagcgattctccagtcagtgattgagaaagccactcccgggtcagcgaaa
tgggcctggatgagaagaggtctgtactacctgaaggttggggagcatcaacaagctgta
gctgatctgcaggcagctctgagagcagaccccgaggactgggtgtgttgggagtgttta
ggcgaggcgtacttgaaccgccggagcttcacagcagctctgaaggcctttggtaaggcc
catcagctccagccctcctccatctacagtgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcagagaggcagttgcagagtacttgcagatcacagcaaagcaggactat
gttcctgctcttaaaggtcttggtgagtgccagctgtctctggcaaaaggtttaatggaa
gactgccgagatgggggagccattgacctgattcagcaagccatacagaacctcttccga
gctgtggtgctgcgtccagacctgtcctgtttgtggaagctgttgggagatgcttgcacc
gcagtcagcaccgtgtcgtcaaacagagcccaggtcctggtgcccgccctgttggctggt
tcagacaccaacacccagagccaagcactgaaccaggcccagaccctcagagttggtgag
aggtgttatgtccgtgctttgaagatgatgtctgaggttcccagcctttggtatgaccta
ggactcaactactaccgccagtccagcatacacagacctgatgagggagatcagaactcc
caatctctgctcctagagaaggcccagcagtgtttaaaaaaggctattatgatggacagt
ggggccaatagctactggaatgccctgggagtgatttccatgagcaaagatctcgagaac
ttcgctctggcgcaacattgcttcatcaagtccatacaagttgagccaaataatgttgtt
gcttggaccaacctaggtaccctttatttgaaaaaggacaatatagagcttgcacacgag
gccttcaagattgcccagtcgctggagccgctttatgtcaactgctggattggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccaccgaa
ctcagcacacatatggagggagtgaagggttatgccttctgggtatgttccactctgctt
gataagaccaacagagactcggaactatatcgctacaacatagtccagatgaacgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcattatgctgggctacatgaatgagcatctgcagctgaagaggcaggccgtacaggct
tacaaaagagctgttgaactgcttcagtccatgtcctcatcagaacaactggcttttgct
ctgtgtagctatggccgtgctttgtgcacctcaggccagttggaggaggcggtgcgtgtt
tataattccactccactgcaggagctcagtgatctggctgggctggctctggcatactgc
agggccggactcatcccagagagcattaacgcctatgaacgtgccttggcggtggcttcc
attgagaaggaaaaggcttacatcttgactgctctggcgctgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcaatgttaaaggagccaattgca
gagtccctgctgtgtttatgtgccctgggattggtccacagtgatgccacattagctgct
gctgccctgactgagcttttgaaacatgtttcagtctcagggaaagttaccgagcagcgg
tgtctgctcacctgcgccttgctcgccctgcagggcaactacagcgcagtgcaaagagag
gcttccagggctgtacacagcaatcctggaaacccatctctgtggtccctgttgtccagg
ctgataccacaatactaccccagaaaggcaaatggcggagcgatggctggccatgttgcc
tgtctctccagtatgacccaaggaaagagggcgctgttgtacagtggagtgaaccagctg
gctaatgggagacactccatagagaacagtcacagaaatgccctgaagactatgcagaga
gctgtgctgctctgtcctgatgatccagcagcctgggcgggattgatggccgcctgtcac
acagaaaacacttcgtgttatctttcaggttctgctcctggcaggcaaggactggagcaa
accctcatgtcagtggtttctgagaaagtgcataatgtggaagagatagagcgccctcta
gcccagactctagaaggctgggtactacaacaggcagtctctggtctcacgctgggggga
cagctggaacaggcagaagctctctgcacacaggtgctgaatgtttctccccaacaccca
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttttggccagtggtggt
actgccctcccagactctgtactggagcaactgaacaacgcagtgatgatgaaccccacc
aaccttggggcgtggcattggctggcggaggtgtatcgtagccagggcctgctggtccag
gcagtccaggcctacaggcagagtctgcagctagcctcacagctcggcctgcacagcagc
caggtagccagcctgctgcggctagccctgctagccctagaaccctgtctggcaggggtc
ccaagaaaagactggacagacatgatactagaagccaccactgaagtcttgaagctgggt
tcgtcccctatggccctccttttccaggccctgctccagtatgtgaccaagatggctgct
agggaaacaaggcgtttgttggagaggctggtttactctcaagacttcccagtgacagtg
gtgcaggttgccagctggtacctcctcagacacttgcatgccaaaaacgaccaggagcta
atgaatgtccttttgcaacatgccaaaatgaatggagaccaaagactgctggagtttcat
tcactgcttgcctctccttcaacctga
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integrated database retrieval system
