Etheostoma spectabile (orangethroat darter): 116691573
Help
Entry
116691573 CDS
T08457
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116691573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116691573
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116691573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
116691573
NCBI-ProteinID:
XP_032375206
LinkDB
All DBs
Position
1:31986915..32024153
Genome browser
AA seq
1199 aa
AA seq
DB search
MLSWVVKVVPKPPEPPPRTPEDQKDVKPAAAPAPEKKVKFQDECKKKAPTAEKPKQEVQP
AEENGPAPGSQPGVLTWISAALPQPPVSPKLDRDNTPTKEEKAPGKGMMAWISQGLEKVV
PQPDLNKKETSELPIEVHQPAAKEPQITVVEVESDREDQTDNRPLPPRVIEWIKHGLENM
VPQPEIYVRSKTEINKKPEAPAAAETPALKPAPAPKPSADADNIMGWIGRMLPQPAHTQE
PGGDEVQKIRIVQDQMALVLEDVGHDEDKAIAQKEARQESQDNENLRGEAQTRIDPSAPR
TDVEKEAGESVPAHEEERLNQDPLEAARNAEEMARKAAEEAARQLEVQHLAKIGTETLPD
SSELLSNIQEEEDEDDPELQSLQDESEDSNRSPEENKKLNQTLVDIGPAEDQTTSTALST
NAETPSDRRDLESPVPQTITQQPQPQAPITSTGSHQVQQETDRKEELQGGSEEPNAEEGG
CGGRGGPGVGGAPVLKVEDVDREVNIPQIITSTEPESGHESVRLSTLRAAEEEADVNLKT
WSSQEDLLTADSERPLSAASGGAPVQERLSQLVRLFRGRSELRRDRLVDPDESEEESPSA
SPSKAAPPPPPPPPPPDEKKDDAPAEGGGEEEEEEEEEEKKELVLPFEILGRPVVFPRPP
QLPPMPDWLRAVVEYRFPSSIDPFTDLIYVMWLFCVVAAWNWNVWLIPVRWAFPYQTPEN
LHLWLLMDYTCDFIYILDILVFQPRLQFVRGGDIVCDKKDMRDNYMTTERFKMDILSLVP
MEIFYFFTGVNSLLRFPRLLKYVAFFEFNDRMEAVMKKAYIYRVIRTSSYLLYSLHINAC
LFYWGSAYEGLGSTKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPSTVFEICFQLLNYFV
GVFAFSIMIGQMRDVVGAATAGENYYRACMDSTIKYMNNYHIPRDVQNRIKTWYDYTWKS
QGMLDEQELLVQLPTKMRLDMAVDVNYSIISKVALFQGCDRQMVFDMLTRLKSVVYLPGD
FVCKKGEIGREMYIIKQGEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVK
AHGFANLFILDKKDLAEILVHYPESQKLLRKKAKTMLTKDKKTDEKGAGAAAMHVLPPRP
DTPEMFKAALKVAQQKRLEGVFSTLRTSYEASQAPPSTPPSPRRRSSSLPLSPGQDDKS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtcgtcaaagtcgttcccaaacccccggagcccccgcccaggacccct
gaagaccagaaggacgtgaaaccagccgctgccccggctcctgagaagaaagtgaaattt
caggacgagtgtaaaaaaaaggctccaacagctgagaaacccaaacaggaagtgcagccg
gcagaggagaatggcccggctcctggttctcagcccggtgtgttgacgtggatcagcgcc
gctctgcctcaaccgccggtctcgccgaagctggaccgggacaacacccccaccaaggaa
gaaaaagccccaggtaaagggatgatggcgtggatctctcagggtctggagaaagttgtt
cctcagccggatctgaataagaaagaaacatctgagctgcccatcgaggtgcatcaacca
gctgcaaaagagcctcagatcaccgtggtggaggtggaatcagatcgagaagatcaaacc
gacaacagaccactgccacccagggtgatagagtggattaaacacggtctggagaacatg
gttcctcagccggagatttacgttcgctcaaagacagaaatcaacaagaagcctgaagct
cctgctgcagcggagactccggcactaaaacctgctccagccccaaaaccttctgctgac
gctgacaatattatgggatggatcggccgcatgttgccccagcctgcacacactcaggag
cccggcggtgacgaggtgcagaagatccgcatcgtccaggatcagatggccctggtgctg
gaggacgttggacacgacgaggacaaagccatcgcgcagaaggaggcaagacaggagtcc
caggacaacgagaatctgagaggagaggcacagacccggatcgatccaagcgctcctagg
acggacgtcgagaaggaagctggagaatcagttcctgctcacgaggaagaaagactaaac
caggatcctctcgaggcggcccgcaacgcggaggagatggcccggaaggccgcggaggag
gccgcgcgacagctggaggtccagcatttggctaagatcggcacggaaacgctgccagac
tccagcgagctactgtccaacatccaggaggaggaggacgaggatgacccagagttgcag
agcctgcaggacgagagtgaagacagcaataggagtcctgaggaaaataaaaaactaaat
cagaccctggtggacatcggtccggctgaagaccagaccaccagcacggccttatcaaca
aatgccgagaccccgtcggacaggagagacctggagagtccggtcccccaaaccatcacc
cagcaaccacagccacaggctccaatcacctccacaggttcacatcaggtccaacaggag
accgacaggaaggaggagctgcaaggaggaagtgaagagcccaacgcagaagaaggcgga
tgtggagggaggggtgggccaggtgtgggtggagctccggtgctgaaggtggaggatgtg
gatcgggaagtgaacattccccaaattatcaccagcaccgaaccggagagcggccatgag
agtgtccggctgtcgacgctcagagctgcagaagaagaagcagatgttaatctgaagacc
tggtccagtcaggaagacctgctgactgcagacagcgagaggcctctgtctgcagccagc
ggcggcgccccggtccaggagcgtctgagccagctggtccggctgtttagaggcagatca
gagctccggagagaccggctcgtggacccagatgagtccgaggaggaaagtccttcagcc
tccccgagcaaagctgctcctcctcctcctcctcctcctcctcctccagacgagaagaag
gacgacgcgcctgcagaaggaggaggagaagaagaagaagaagaagaagaggaggaaaag
aaggaactcgtcctcccctttgaaattttaggacgtccagtcgtgtttcccagaccgccc
caactgcccccgatgcccgactggctccgagccgtcgtggagtaccgcttcccctccagc
atcgaccctttcaccgatctgatctacgtgatgtggctgttctgtgtcgtggcggcgtgg
aactggaacgtgtggttgatccccgtccgctgggccttcccctaccagacccccgaaaac
ctccacctgtggctgctgatggactacacctgcgacttcatctacatcctggacatcctg
gtcttccagccccgactgcagttcgtccgcggaggagacatcgtgtgtgataaaaaggac
atgagagacaactacatgaccactgagagatttaagatggacatcctcagtctggttccc
atggagatattttacttcttcaccggcgtgaactctctgctgcggttccctcgtctgctg
aagtacgtggccttcttcgagttcaacgaccggatggaagctgtgatgaagaaagcgtac
atctacagggtgattcgaacgtcctcctacctgctgtactcgctgcacatcaacgcctgt
ctcttctactggggctcggcctacgagggtctggggtccaccaagtgggtctacaacggg
aaggggaacgcttacatccgttgctactactttgcggtgaagacgctgatcaccatcggg
ggactccccgacccctccaccgtcttcgagatctgcttccagctcctcaactacttcgtt
ggcgtcttcgcgttctccatcatgattggtcagatgcgggacgtggtgggtgcagcgacc
gccggggagaactactaccgcgcctgcatggacagcaccatcaagtacatgaacaactac
cacatcccccgggacgtccagaaccgcatcaagacctggtacgactacacctggaagagc
cagggcatgctggatgaacaggagttgctggtgcaacttcccaccaagatgcgtctggac
atggccgtggacgtcaactacagcatcatcagcaaggtcgccctgttccagggctgtgac
agacagatggtgttcgacatgctgacgaggctcaaatctgtcgtctacctgcccggagac
ttcgtctgtaaaaagggggagatcggcagggagatgtacatcattaagcagggggaggtc
caggtggtggggggtccagacctgcagacggtgtttgtcaccatcagagccggctcggtg
ttcggagagatcagtttgctggcgggcggcggcgggaaccggcgcaccgccaacgtgaag
gcgcacggattcgccaacctcttcatcctggacaagaaggacctggcagagatcttagtc
cactacccggagtcccagaaactgctccgcaagaaggccaagacgatgttgacgaaggac
aagaagacggatgagaagggcgcgggtgccgcggcgatgcacgtcctcccccccagaccg
gacacccccgagatgttcaaggcggcgctgaaggtggcgcagcagaaaagactagagggc
gtcttctccaccctgaggacaagctacgaagcatctcaggctcctccctccactcctccg
tctccgaggcgacgcagctcctctcttcctctctctccgggtcaggacgataaatcttga
DBGET
integrated database retrieval system
