Etheostoma spectabile (orangethroat darter): 116700545
Help
Entry
116700545 CDS
T08457
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03320
PPAR signaling pathway
esp04120
Ubiquitin mediated proteolysis
esp04137
Mitophagy - animal
esp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116700545 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116700545 (ubb)
04137 Mitophagy - animal
116700545 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116700545 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116700545 (ubb)
Ubiquitin system [BR:
esp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116700545 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Dsc3_N
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
116700545
NCBI-ProteinID:
XP_032389727
LinkDB
All DBs
Position
13:complement(4310400..4315819)
Genome browser
AA seq
525 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSXTIENVKA
KIRTRKDPPDQQADLCGKQLEDGRTLSTTTSRKNPPPSVLRLRGGMQISLRPSLADITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPRPAEVIF
VANSWNGRTLSDYXIQKESTLHCLRLRGGMQIFVKTXTGKTITLEVEPSDTIENVKAKIQ
DKEGXPPDQQRLICWQHVEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcacccttgaggttgagcccagc
gatacaattgaaaatgtcaaggccaagatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgctggcaaacagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtgctgcgtctgaggggaggcatgcagatcttt
gtcaagaccctcactggcaagaccatcaccctggaggtcgagccaagtgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcatcccccctgaccagcagaggctgatc
tttgctggcaaacagctggaagatggccgcaccctctctgactacaacatccagaaagaa
tccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggtggagcctagcnacaccattgagaacgtcaaggcc
aagatcaggacaaggaaggatccccccgaccagcaggctgatctttgtggcaaacagctg
gaagatggccgcaccctctcgactacaacatccagaaagaatccacccccatctgtcctg
cgtctgaggggaggcatgcagatttcgttaagaccctcactggcagacatcaccctggag
gtggagcctagcgacaccattgagaacgtgaaggccaagatccaggacaaggaaggcatc
ccccccgaccagcagaggctgatctttgccggaaaacagctggaagatggccgcaccctc
tctgactacaacatccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggc
atgcagatcttcgtcaagaccctcactggcaagaccatcaccctggaggtggagccaagt
gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcatcccccccgaccag
cagaggctgatctttgctggcaaacagctggaagatggccgcaccctctctgactacaac
atccagaaagaatccaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggtggagccaagcgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcatcccccgaccagcagaggtgatcttt
gtggcaaacagctggaatggccgcaccctctctgactacnacatccagaaagaatccacc
ctccactgcctgcgtctgaggggaggcatgcagatctttgtcaagactnncactggcaag
accatcaccctggaggttgagccaagtgacaccattgagaacgttaaggccaagatccag
gacaaggaaggcnatccccccgaccagcagaggctgatctgctggcaacacgtggaagat
ggccgcaccctctctgactacaacatccagaaggagtccaccctccatcttgtgctgcgt
ctgaggggtggccagtaa
DBGET
integrated database retrieval system
