Etheostoma spectabile (orangethroat darter): 116700586
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Entry
116700586 CDS
T08457
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116700586 (taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
esp01001
]
116700586 (taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116700586 (taf1)
03036 Chromosome and associated proteins [BR:
esp03036
]
116700586 (taf1)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
116700586 (taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116700586 (taf1)
Protein kinases [BR:
esp01001
]
Serine/threonine kinases: Other
TAF1 family
116700586 (taf1)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116700586 (taf1)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
116700586 (taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
116700586
NCBI-ProteinID:
XP_032389791
LinkDB
All DBs
Position
13:complement(27069686..27087109)
Genome browser
AA seq
2010 aa
AA seq
DB search
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEDDSVLDNESKKHLAGLGSLGLGSLITEIT
ANEEGDQDENRDSGSVDAEGWVKSTDDAVDYSDISEVAEDETKKYRQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPSLPTAAKKEEPSSPSTNVGEEGDGIILPSIIAPSSTAD
KVDFSSSSDSESETDRPCQGLGAGGPPDSLNLPLAGIMQKDAAKALPGVTQLFPEFRPGR
VLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEGESTEQSQEKKSGWLYEYAP
PPPPEQCLSDDEITMMAPVESKFSQTCGDGDKEAESRPKVAEWRYGPAQLWYDMLGVSED
GSNFNYGLKLKEHQSSEPQQQDTQKEITETAHEFLRREANDDDDNDNDDEDKDLSALENE
LFLMVTQLKWEDDIIWNGEDIKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSQ
LVPPTPPPMPKVSSISGSKREKNSHENQSFLEEDSPWFSIFPIDSEELVYGRWEDNIIWD
DQEMDHILMPPVLTLDPNDENIILEIPNEKEEMTSHSPSKENKKETAIKKSRILLGKTGV
IKDEPQQNMSQPEQKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHM
GPMKLRQFHRPTLKKYSFGSLAQPGPHPVQPLLKHIKKKAKMREQERQAAGGGDMFFMRT
PQDLTGKDGDLILAEYSEEYPPLIMQVGLATKIKNYYKRKPGKDPGAPDCKYGETVYCHT
SPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGYYIRELVDIVVVGQQCP
LFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLK
LCADFKRTDSKAGSRERAFYTYFGFYPEGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCA
YYSMLVAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCL
LEVTGVADPTGCGEGFSYVKVPNKPTQQKDDKEPQPAKKTVTGTDADLRRLSLKNAKQLL
RKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQ
RIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERK
ELQRMLMGEESDRDHKGRKERRKGLSSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTF
KDEDGKEYVRCETVRKASVIDAYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQL
RRLKRNQEKDKIKGPPEKKAKKVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPP
SNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQ
LPQKKKRRVGNAVHCDYLNKPHKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPV
NAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREAVEVIVKNSATYNGAKHPITQV
AQSMLDLCDAKLKEKEDRLVRLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFH
HPVNKKFVPDYYKVIVSPMDLENIRKNISKHKYQNRDAFLSDVSLIHANSIKYNGPDSPY
TKTALDIVNVCKQTLAEYDEHLTQLEKDISTAKEAALDAADLESLDSMMPGPYTPQPADL
FDSGASGSLPRETSSIFSEGPLVVTPEKRGGQGRHGRRPGEEESDVDIEGFEEEDDGKPK
TPAPAEDADRDLEDDDDEEDMLLPPRRRVHDQEDEEEDEEEEEDGLSNRPAQASVLYQDL
LMSDGEDDASEEEGDNPFSSIQLSESGSDSDRELDVRPAPPRRAQETARMGMEQDESMMS
YEGDGPDGPHMEDSNVSYGSYEETESRSHMQPSSMGNGEDYGISEEEEEDEEDEARRRGP
AVLSQVQLSEDEESEEFRSIGGDSDMDSDI
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggacagtgacgaggatcaggatcgccctttctctctaactggattcctc
ttcggaaacatcaatgaagatggacagcttgaggatgacagtgtactggacaatgagtcc
aaaaagcatttggctggtttgggtagtctgggtctgggctcactcattacagagatcact
gccaacgaggagggtgatcaagatgaaaacagagactctggtagtgtggatgcagaaggt
tgggtgaaaagcacggacgatgcagtggattactctgacattagtgaggtggctgaggat
gagacaaaaaagtaccgtcaggccatggggtctttgcagcccagcagaaaaacagatgac
gaggatgactatgatgctgactgcgaggatattgattctaagcttatgcctcctccacca
ccaccaagtcttcctacagctgcaaagaaagaggaaccctcctctccgagcacaaatgtt
ggggaagagggggatggcatcatcctgccctccatcattgcaccatcttctacggctgat
aaggttgacttcagcagctcctcagactctgagtcagagactgaccgtccctgccagggt
ttgggggcgggaggcccccctgatagtctcaacctccctcttgctggcatcatgcaaaaa
gatgctgccaaagcgcttccaggtgtcacacagctcttcccagagtttaggcctggaagg
gtgcttaggttcttacgactgtttggtcctggtaagaacatgccatccgtttggaggagt
gcccgcaggaagaagaagcggaagcacagagaccctcagcctgggacacctcctccagaa
ggagagtccacagagcaaagccaggagaagaagtctggatggctgtacgagtatgcaccc
cctccacccccagagcagtgtctctctgatgatgagataaccatgatggccccagtagaa
tctaagttctcacaaacttgtggggatggggacaaggaggcagagtctcgacctaaagta
gcagaatggagatatggtccagcccagctctggtacgacatgctaggcgtctctgaggat
ggaagcaacttcaactacggcttaaagctaaaagaacaccagagcagtgagcctcagcag
caggacacacaaaaagaaataacagagactgcacatgagtttctgaggcgggaggccaat
gacgatgatgataatgataatgatgatgaagataaggatttatcagcccttgagaatgag
ctcttcctgatggtcactcaactgaaatgggaggacgatatcatctggaatggggaggac
ataaaacacaagggcacaaagactcagcgggccagcctggctggatggctgccctctagc
atgacccgcaatgccaacgcttataacgcccagcagggtctaacaagaagtaattcccag
ttggtgccacctacgcctccccccatgcccaaagtttcttcaatctctggctctaagcgt
gaaaaaaacagccatgaaaatcaatccttcctggaagaagactctccctggttctccatt
tttcccattgacagtgaggagttagtgtatggacgctgggaagataacataatctgggat
gaccaggagatggatcacatcctcatgccacctgttcttacactggatcccaatgatgaa
aatatcatcctagaaatccctaatgaaaaggaggagatgacttcccactccccgtcaaaa
gagaataagaaggaaacagcaatcaaaaagagccgcatcctgctgggaaaaactggggtg
ataaaagatgagccacagcagaacatgtcccaacctgaacaaaaggacccctggaacctc
tccaatgatgagttctactatcctaaacagcaaggcctgagggggaccttcggtggcaac
atcattcagcactccatccctgcactggagctaaggcagcccttctttcctactcacatg
gggcccatgaagctgcgtcagtttcatcgaccgactctgaagaaatactcatttgggtct
ttggctcagccaggtccccatcctgtccaaccactgctcaaacacattaagaaaaaggct
aagatgcgagagcaggagcgacaggcagcaggaggaggagatatgttcttcatgcgaacc
ccacaggacttgacgggtaaagatggagatctgatcctggccgagtacagtgaagaatac
ccccctctcatcatgcaagttggcttggccactaagatcaaaaactactacaaaaggaaa
cctggaaaagatcctggagcacccgactgtaaatatggagagactgtgtactgccacaca
tcccctttcctgggttctcttcatcctggacagctgctccaggcatttgaaaacaacctt
ttccgtgctccaatatacctgcacaagatgccagagactgattttttggttctgcgaacg
cgacacggctactacattagagagcttgtggacattgttgtagttggtcagcagtgcccc
ttatttgaggttccagggcccaactccaaacgagccaatactcatatcagagacttctta
caggtgttcatttaccgcttgttctggaagagcaaggatcggcccaggagaatccgcatg
gaggatataaagaaagcttttccttcacactcagagagcagcatcagaaaacgactaaaa
ctctgtgctgacttcaaacgtacagatagtaaagcagggagcagggaaagagctttttac
acctactttggattttatcctgaagggatggactctaactggtgggtgcttaagcctgac
ttccgattgcctacagaggaggagatcagggccatggtgtctccagagcagtgctgtgct
tactatagcatgcttgtggcagagcaaagactcaaggatgctggatatggtgagaaatcc
ttttttgctccagaggaggagaacgaagaggactttcaaatgaaaattgatgatgaggtg
cggacagctccttggaacacaacaagagccttcatttctgccatgaaggggaaatgcctt
ttggaagttacaggcgtggctgatcctacaggctgtggagaaggtttttcctacgtcaaa
gtgcccaacaagcctactcaacagaaggatgacaaagagccacagcctgccaaaaagaca
gtgacggggacagatgctgatctgaggagactctcactgaagaatgccaagcagctgctg
cgcaagtttggtgttccagaggaagagatcaagaagctctcacgctgggaggtgattgac
gtggtgagaaccatgtccacagagcaggcacgttctggggagggacccatgagcaagttt
gccagaggctctcgtttctccgttgcggaacaccaagaacgctacaaggaagagtgccag
aggatctttgacctgcagaacaaagtgttagagtcgacagaggtgctctccacagacaca
gacagcagctcggcagaggacagtgactttgaggagatggggaagaacattgagaacatg
cttcagaacaagaagaccagctcccagctttcccgtgagagggaggagcaagagaggaag
gagctgcagaggatgctaatgggcgaggagagtgaccgtgaccacaagggacgcaaggag
cggcgcaaaggcttgtccagctccttatccaccagttcccacaaggatgatgacacttcc
tccgtcaccagcctaaactcttcagccacaggacggcgactcaagatctatcgcaccttc
aaggatgaggacggcaaggaatatgttcgatgcgagacagttcgcaaggcttctgttatt
gacgcctacaccaggatccgaaccaccaaggatgatgaattcatacgaaagtttgccctc
tttgatgagcagcacagagaggagatgagaaaggagcgccggcgtattcaggagcagctg
aggaggctgaagagaaaccaagagaaagacaagatcaagggaccgccagaaaagaaggcc
aagaaggtcaaagagagaccagacctcaaggtaaaattaaagtgcggagcatgtggagcc
attggacacatgaggaccaacaagttttgcccgctgtactatcagaccaacgccccacct
tctaacccagttgcaatgacagaggagcaggaggaggagctggaaaagaccgtcatccac
aacgacaatgaggaactgatcaaggtggagggcaccaaaattgttttgggcaaacaactc
attgaaagtgctgatgaagtgcgcagaaagtctttagtgctcaagttccccaagcaacag
ctcccacagaagaagaagcgacgcgttggcaacgctgtgcactgtgactacctcaataaa
ccacataaggccatccaccgcagacgcacggaccccatggtgacattgtcttctgtgcta
gagagcatcatcaatgacatgcgggatcaccctaatacatatccattccacacaccagtg
aatgctaaggttgtgaaggactactataagatcatcacacggcccatggacctgcagacg
ctaagagagaatgtacgtaagagactgtacccatccagggaggagttccgtgaagcagtg
gaggttatcgtcaaaaacagcgccacctacaatggggcaaaacatccaataacacaggta
gcacagtccatgctggacctgtgtgatgctaaactgaaagagaaggaggacaggctggta
aggctggagaaagccatcaaccccttgctggatgatgatgatcaagtggccttctctttc
attctggacaacattgtgacccagaaaatgatggtggttcccgattcatggccatttcac
catcctgtcaacaaaaaatttgtgcccgactattacaaggtgattgtaagcccaatggat
ctggagaacatccgcaagaacatctccaaacacaaataccagaaccgagatgcgttcctt
tcagatgtcagtctcattcatgccaacagtatcaagtacaatggcccagacagtccttat
accaagacagccctggatattgtcaatgtgtgcaagcaaaccttggcagagtatgatgag
cacttgactcagttggagaaggacatctctactgctaaagaggcagctttagatgcagct
gacttggagagtctggactcaatgatgcctgggccatacacaccacagcctgctgatctg
tttgacagcggtgcttcagggagtctgcccagagagaccagcagcattttctctgaggga
cctctagtggttactccagagaagagaggggggcagggtcgccacggcagaagacctggg
gaggaagagtcagatgtggacattgaaggctttgaggaggaagatgatggcaaacccaaa
actcctgctcctgcagaggacgcagacagagatctagaggacgacgatgatgaagaggac
atgttgctgccacctcgcagacgggtgcacgaccaggaggacgaggaggaggacgaggag
gaggaagaggacggactatctaaccgcccagcccaagccagcgtgctgtaccaggatctg
ctcatgtctgacggagaggacgatgccagcgaagaggagggcgacaaccctttctcctcc
atacagctgtcggagagcggtagcgattctgatagagagttggatgtgcgacctgcaccc
ccacggagagctcaagagacggcccgcatgggcatggagcaagacgagagcatgatgtca
tatgaaggggacgggcctgatgggcctcacatggaagacagcaatgtcagttacggcagc
tatgaggagacagagagccggagtcacatgcagccctctagcatggggaacggagaagac
tacggcatcagcgaagaggaggaggaagatgaagaggatgaagcacggaggagaggccca
gctgtgctctcccaggtccagctcagtgaagacgaggagagcgaagagttccgatctata
gggggagacagcgacatggactctgacatctag
DBGET
integrated database retrieval system
