Etheostoma spectabile (orangethroat darter): 116703390
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Entry
116703390 CDS
T08457
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116703390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116703390
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116703390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
Arm
HEAT_2
IBN_N
TOR1L1_N
HEAT_EF3_N
TPR_IPO5
Vac14_Fab1_bd
Cnd1
TPR_DNAAF5
PDS5
HEAT_MROH2B_C
MMS19_C
Adaptin_N
Ltn1_1st
Dopey_N
HEAT_MROH2B_1st
INTS7_N
UNC45-central
TPR_TTI1_C
DUF3689
TPR_IPO11
Caerin_1
Motif
Other DBs
NCBI-GeneID:
116703390
NCBI-ProteinID:
XP_032393990
LinkDB
All DBs
Position
2:complement(22222801..22234017)
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AA seq
903 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPNVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSDDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAGDEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDIDE
DEDDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDAHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIEKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMVSPTHMHMDFAEMYSQQPDQYEAPDKDFMIVALDLLS
GLAEGLGGHVDTLVARSNIMTLLFQCMQSQDTMPEVRQSSFALLGDLTKACFPHVKPCIA
EFMPILGTNLNPEFISVCNNATWAIGEICMQMGVEMQPYISMVLNQLVEIINRPNTPKTL
LENTAITIGRLGYVCPQEVAPMLPQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGG
VVQDFIFFCDAVASWVNPKDDLRDMFYKILHGFKEQVGEENWQQFSEQFPPLLKERLAAC
YGV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccagatgaacagggtctgcagcaagtgcttcagctactcaaggactcc
cagtccccagacacagcaacacagagagctgtgcaagaaaaactggagcaacttaatcag
tttccagatttcaacaactatctcatctttgtcctcacaagcctcaaatctgaggacgag
cccactcgctctctgagcggtctcatactgaagaacaatgttaaggctcactaccagaac
ttccctcccaatgtggctgacttcatcaaacgagaatgcctcaacaacatcggagatcct
tcaccgcttattagagctacgattggcatcctgatcacgaccattgcctctaaaggagag
ttgcagacctggccagaactgttgcctcagctttgtaatctgctcaactcggacgactat
aacacctgcgagggttcttttggagcattgcagaagatctgcgaggattcatccgagttg
ttggatagcgatgctctgaacagacctcttaacatcatgatccccaaattcctacagttt
tttaagcactgcagccccaagatcaggtcacatgctatagcgtgtgtaaaccagttcatc
attggtcgagctcaagctctgatggataacattgacaccttcattgagagtttgtttgca
ctggccggtgacgaggacagtgaggtgcggaagaatgtgtgcagggctctggtcatgctg
ctggaagtccgcattgaccgcctcatcccacacatgcacagcattatccagtacatgctg
cagcggacccaggacccagatgagaacgtggctctggaggcctgtgagttctggctgact
ctggctgaacagcccatctgcaaagaggccctgtctgggcacttggtccaactgatccct
atcctggtgaatgggatgaaatactcggagattgacattattcttctgaagggcgacgtt
gaagaggatgaggcagttcctgatagtgagcaagacatcaaacctcgcttccacaagtcc
cgaaccgtaactctgcagcacgaaggaggggagggcgaggagggggaggacatcgatgaa
gacgaggacgacgacgatgacacactctctgactggaacctacggaagtgttcggccgcg
gctctggacgttcttgccaacgtgtttcgtgaggagttgcttccccatctcctgcccctg
ctcaaaggactgctgttccaccctgactgggtcattaaggagtctggcatcctagtgctg
ggagctattgctgagggttgcatgcaaggcatggtaccttacttgcctgagctcatcccc
cacctcatccagtgtttgtgcgacaagaaggccctggtccgctccattgcctgctggacc
ctcagccgctacgcccactgggtggtcagccagccccctgacgcacacctcaaacccctc
atgactgagctgctcaaacgcatcctggatggaaataagagggtacaggaagcagcatgc
agcgcgtttgccaccctggaggaggaggcgtgcacagagctggtgccttacctgagcttc
atcctggatacgctggttttcgcttttgggaagtaccagcacaagaacctgctcatcctc
tatgatgctataggaacactggcggactctgtgggacaccatctcaaccagcctgagtac
atagagaagctgatgcctccgctgatagccaagtggaatgagctaaaggacgaagacaaa
gatctcttccccctgcttgagtgtctgtcatctgttgctacggcgctgcagagcggcttc
ctcccctactgcgagcctgtctaccagcgctgtgtcaccttggtccagaagacactggct
caagccatggtgagccccactcacatgcacatggactttgcagagatgtacagtcagcag
ccagaccagtacgaagcacccgacaaggacttcatgatcgtggcattagatcttttaagt
ggcttagctgagggactggggggccacgtggacacgcttgtggcccgcagtaacatcatg
acgctgcttttccagtgcatgcagtcccaggatacgatgcctgaagtaagacagagctca
tttgctctgctgggtgacttgaccaaggcttgcttccctcatgttaaaccgtgtattgct
gaattcatgccaatccttggaacaaatctcaacccagagttcatctctgtctgcaacaat
gcaacttgggccataggagagatctgtatgcagatgggagtggagatgcagccgtacatc
tctatggtcctgaaccagctggttgagattattaatcgacccaacacccccaagaccctg
ctggagaacaccgcaatcaccatcgggcggctgggctacgtgtgtcctcaggaggtcgcg
cccatgctgccgcagtttatccggccctggtgtacgtctctgcggaacatcagagacaac
gaggaaaaagactctgccttccgtgggatttgcatgatgattggtgtgaaccctggaggc
gtggtgcaggacttcatcttcttctgtgacgcagtggcctcctgggtgaatcctaaggac
gatttgagagacatgttctataagatcttgcacggttttaaggaacaggttggggaggag
aactggcagcagttctcagagcagttccccccactgctgaaggagagactggcagcctgc
tatggcgtttag
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