Enterococcus silesiacus: ATZ33_08385
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Entry
ATZ33_08385 CDS
T04218
Symbol
ligA
Name
(GenBank) aromatic ring-opening dioxygenase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ess
Enterococcus silesiacus
Pathway
ess03030
DNA replication
ess03410
Base excision repair
ess03420
Nucleotide excision repair
ess03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATZ33_08385 (ligA)
03410 Base excision repair
ATZ33_08385 (ligA)
03420 Nucleotide excision repair
ATZ33_08385 (ligA)
03430 Mismatch repair
ATZ33_08385 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ess03032
]
ATZ33_08385 (ligA)
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_08385 (ligA)
Enzymes [BR:
ess01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ATZ33_08385 (ligA)
DNA replication proteins [BR:
ess03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATZ33_08385 (ligA)
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ATZ33_08385 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATZ33_08385 (ligA)
MMR (mismatch excision repair)
DNA ligase
ATZ33_08385 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ATZ33_08385 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ALS01382
UniProt:
A0A0S3KAN3
LinkDB
All DBs
Position
complement(1826010..1828055)
Genome browser
AA seq
681 aa
AA seq
DB search
MTQVPITLAEATEKAKELRIQLNQYSHEYYVADKPTVEDYVYDRLYQELSDIETEYPDLI
TSDSPTQRVGGKILQGFEKVTHEVQMYSLNDGFSKEDIYDFDERVQKLAGKQVGYCCELK
IDGLAISLKYENGKFVQGATRGDGTVGENITENLKTVKSIPLELKKPISVEVRGECYMPK
QSFVNLNKEREEAGQDVFANPRNAAAGSLRQLDTSMVAKRNLSTFLYTVADFGPMTAQTQ
FDALNELSEIGFRTNPEKKLCQNIDEVWAYIEEYHEKRSELPYEIDGIVIKTNEFTIQDE
LGFTVKAPRWAIAYKFPPEEAQTVVEEIEWTIGRTGVVTPTAVMQPVRVAGTTVSRASLH
NADFIAMKDIRLNDAVIIYKAGDIIPEVAQVLTEKRDENSQPYEIPTHCPVCNSELVHLD
EEVALRCINPKCPAQIKEGLNHFVSRNAMNIDGLGPRVLEQMYDKELIADVADLYFLTEE
QLMTLEKIKEKSANNIYQAIAASRDNSVERLIFGLGIRHVGSKAAKVLAEHFGDLRTISK
ATKEEVVALDSMGEIIADSLVTYFENEEVHELMDELTKAGVNFEYKGIRTSQLEAVESPF
KDKTVVLTGKLTHYNREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAQDLGVE
VWDEQQMVNALDNSYTKEEAE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagtgccgataacattagctgaagcgacagagaaagcaaaagaactacggata
cagttaaatcagtattcccatgaatattacgttgctgataaaccgaccgtagaagattat
gtgtatgatcgcttatatcaagaattatcagacatagaaaccgaatatccagatttgatc
acttctgattcaccaacgcagcgagttggtggaaagattttacaaggttttgaaaaagtc
acacatgaagtgcaaatgtatagtttgaatgatggtttcagtaaagaagatatttatgat
tttgacgaacgtgtgcaaaaattagctggcaaacaagtgggatattgctgcgagctaaaa
atcgatggattagcaatttcattaaaatatgaaaatggcaagttcgttcaaggtgcgact
cgtggtgatggaacagttggtgaaaatatcacagagaatctgaaaacagtcaaatcaatt
cctttggagctgaaaaagccaatttcagttgaagtccgtggtgaatgttatatgccaaaa
caatcgtttgtcaatttaaataaagaacgtgaagaagcaggacaagatgtttttgcgaat
ccacgaaatgcagctgctgggagcttgcgtcagttagatacaagtatggttgctaaaaga
aatcttagtacatttttatacactgtggctgattttggaccgatgacagcacaaactcag
ttcgatgcgctgaatgaattatcagaaattggttttagaaccaatcctgaaaaaaaacta
tgtcaaaatatcgatgaagtttgggcttatatagaagaatatcatgaaaaacgctcagaa
ttaccgtatgaaatcgatggaatcgtgatcaagaccaatgagttcacgatccaagatgaa
ttagggtttacggtcaaggcccctcgttgggcaattgcgtataaattcccaccagaagaa
gctcaaacggtagtagaagaaatcgaatggacgattggacgaactggtgtcgtaacgcca
actgctgtgatgcagcctgttcgtgtggcggggacaacggttagccgagcaagtttgcat
aatgctgatttcatcgcaatgaaagatattcgcttgaacgatgcagtcattatttacaaa
gctggcgatattattccagaagtcgcacaagtcttgaccgaaaaacgggatgaaaatagt
caaccctatgaaattccaactcattgtccagtttgtaatagtgagttagttcatctggat
gaagaagttgctttacgttgtatcaatccgaaatgtccagctcagatcaaagaaggactc
aatcattttgtgtctagaaacgcaatgaacatcgatggcttaggtccgcgcgtattagag
caaatgtatgataaagagctaatcgctgatgttgctgatttgtactttttaacagaagaa
cagttgatgacattagaaaaaatcaaagaaaaatctgcgaataatatttatcaagcaatt
gctgcaagtcgtgataattctgttgaacgcttgatttttggtttaggcattcgccacgtt
ggttctaaagcagccaaagttttagcagaacattttggtgatctacgaacaatcagtaaa
gcgactaaagaagaagtcgtggcattagattcgatgggggaaatcatcgcagacagttta
gtgacttattttgaaaatgaagaagtacatgaattgatggatgaactgaccaaagctggc
gtgaattttgagtataaagggattcgtacgtcccaattagaggctgtagaatcgccattc
aaagataaaacagttgttttaacaggaaaacttacccactacaatagagaagaagcaaaa
gaaaaaattgaaaatctaggcggcaaagtaaccggcagtgtttccaagaaaacagatatt
gttgttgcaggcgaagatgcgggtagtaaattgacgaaagcccaagatcttggagttgaa
gtgtgggatgagcagcaaatggttaacgcattagataatagctatacaaaagaagaagca
gaataa
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