Enterococcus silesiacus: ATZ33_14140
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Entry
ATZ33_14140 CDS
T04218
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ess
Enterococcus silesiacus
Pathway
ess03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATZ33_14140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ess03021
]
ATZ33_14140
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_14140
Enzymes [BR:
ess01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATZ33_14140
Transcription machinery [BR:
ess03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATZ33_14140
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATZ33_14140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ALS02476
UniProt:
A0ABM5WC69
LinkDB
All DBs
Position
3059879..3063496
Genome browser
AA seq
1205 aa
AA seq
DB search
MAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFQG
NLSLEFVDYELKEPKYTVEEARAHDANYSAPLHVTLRLTNRESGEIKSQEVFFGDFPLMT
EMGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS
YVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGETLSLRNTIEKDLHKNASDSRTEEGLKD
IYERLRPGEPKTADSSRNLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLGETLI
DAETGEIIVEKGTVLTHQVMETLGEHIDNGLNSVTYYPSEDGVVTEPMTVQVIKVLSPKD
PERIVNVIGNGYPDTSVKTVRPADVVASMSYFFNLQEDIGNVDDIDHLGNRRIRSVGELL
QNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
VNKFGFIETPYRRVDRATGKVTDQVDYLTADTEDHYIVAQANSRLNEDGSFAEELVMARL
QSENLEVTIDRVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIQPRSP
LVGTGMEYKSAHDSGAALLCKHDGVVEYVDASEVRVRRDNGALDKYMVTKFRRSNSGTSY
NQRPIVLLGEKVEKGDTLADGPSMEEGEMALGQNVLVGFMTWEGYNYEDAIIMSRRLVKD
DVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVKDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPG
VNMLVRVYIVQKRKINEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPIDVMLNPLGVPS
RMNIGQVLELHLGMAARQLGIHIATPVFDGANDDDVWETVREAGMARDAKTVLYDGRTGE
PFDNRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRV
LDIEEQEIELRDMDDDDDDLITVDALTKFAEQQSAKQLEKEAAEAKEAADAVLEQEIETA
EDTKD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttggctggacacgtagtaaaatacggaaaacaccgcgaacgtagaagtttcgcccggatc
agtgaagtgttggaattacccaacttgatcgagattcaaacagactcttaccaatggttt
ttagatgaaggactaagagaaatgtttgaggacattttaccgatcgacgattttcaaggg
aatttatctttggaatttgtggattatgaattaaaagaacctaagtatacggtagaagaa
gcgcgcgcgcatgacgcaaactattctgcaccgctacatgttactctacgattgacaaac
cgtgaatctggagaaatcaaatcacaagaagtattcttcggtgatttccctctaatgact
gaaatgggaacatttatcatcaatggtgcagaacgagttatcgtttctcaattagtacgt
tcaccaggtgtttatttccatggaaaagtagataaaaatggtaaagaaggctttggctca
acagtgatccctaaccgtggcgcatggttagaaatggaaactgacgcaaaagacatctct
tacgtacgtatcgaccgtacacgtaaaattcctttgactgtattagttcgtgctttaggt
tttggctctgatgatacaatttttgaaattttcggtgaaacactaagcttacgtaataca
atcgaaaaagatttacacaaaaatgcgagcgattctcgtaccgaagaaggcttaaaagac
atctatgagcgtctacgacctggcgaaccaaaaacagctgacagttctcgtaacttgcta
aacgctcgtttcttcgatccaaaacgctatgacttagcgaacgttggtcgttacaaagtc
aacaaaaaattagatttaaaaacacgtctattgaacctaactttaggagaaaccttgatc
gatgctgaaactggcgaaatcattgttgaaaaaggaacggtattaactcaccaagtaatg
gaaaccttaggtgaacatatcgataatggcttaaatagcgtaacgtattacccaagtgaa
gatggtgtggttactgaaccaatgacggttcaagtaatcaaagttctttctccaaaagat
ccagaacgcatcgttaacgtaatcggtaatggctacccagatacaagtgtgaagactgtt
cgtcctgcggatgtcgtagcttcaatgagttatttctttaacttacaagaagacatcggt
aacgtagatgatatcgatcacttaggtaaccgtcgtattcgttcagttggtgaattacta
caaaaccaattccgtatcggtttagctcgtatggaacgtgtggttcgtgaaagaatgtcg
atccaagacactgaaacattgacaccacaacaattgatcaatattcgtcctgttgttgca
agtatcaaagaattctttggttcttctcagttatcacagttcatggatcaaacaaatcct
ctaggtgagttgacacacaaacgtcgtctatctgccttaggacctggtggtttgactcgt
gaccgtgccggctatgaagttcgagatgttcactattcccattatggtcgtatgtgtccg
atcgaaacccctgagggaccaaatattgggttgatcaatagcttgtcaagttatgccaaa
gttaacaaatttgggtttatcgaaacaccttatcgtcgtgttgatcgtgcaacaggaaaa
gtaaccgatcaagtggattacttaactgctgacacagaggatcactacatcgtagcgcaa
gcaaactcacgcttaaatgaagatggctcattcgctgaagaattagtaatggctcgtctg
caaagtgagaaccttgaagtaacgatcgatagagtcgattacatggacgtttcacctaaa
caggtagttgcagttgcgactgcatgtattcctttcttggaaaacgatgactccaaccgt
gccttgatgggtgccaacatgcaacgtcaagccgtgcctttgatccaacctcgttcacca
cttgtgggaacgggtatggaatacaaatcagcacatgactcaggtgccgctttactatgt
aaacatgatggtgtcgttgaatatgtggatgcatcagaagtacgcgttcgccgtgacaat
ggcgcattagataaatatatggtcacaaaattccgtcgttcaaattcaggaacaagttac
aaccaacgtccaatcgttcttttaggcgaaaaagttgaaaaaggcgatacactagcagat
ggaccttctatggaagaaggcgaaatggcgttaggacaaaacgtccttgtcggattcatg
acatgggaagggtataactacgaggatgcgatcatcatgagccgtcgtttggtgaaagat
gatgtctatacttctatccatattgaagaatatgaatcagaagctcgtgatacaaaatta
gggcctgaagaaatcacgcgtgaaattccaaacgtcggggaagatgcgttgaaagatctt
gacgaaatgggcattatccgtattggtgctgaagtcaaagatggcgacctattagtaggt
aaagtaacgcctaaaggggtaactgagttatctgctgaagaacgtttactacatgcaatc
tttggtgaaaaagcgcgtgaagttcgtgatacatcgctacgtgtacctcacggtggcggc
gggatcgttcatgatgtgaaaatctttactcgtgaagccggagacgaattatctccaggc
gtaaacatgttagttcgtgtatatattgttcaaaaacgtaaaatcaacgaaggcgataaa
atggccggacgtcacggtaataaaggggttgtatcccgcattatgccggaagaagatatg
ccattcttaccagacggtacaccaattgatgtcatgttgaacccactaggggtaccatca
cgtatgaatatcggacaagtactagaattacacttgggtatggctgctcgtcagttaggt
atccacattgcaacaccagtattcgatggcgccaatgatgatgacgtttgggaaacagtt
cgtgaagcgggtatggctcgtgatgcgaaaacagttctttatgacggacgtacgggtgaa
ccatttgataaccgtatctctgttggtgtgatgtacatgatcaaattggcccacatggtt
gatgataaattacatgcccgttctattggaccatactcacttgttacccaacaaccactt
ggaggtaaagctcaatttggtggacaacgttttggggaaatggaagtatgggcactggaa
gcatacggtgcagcttacacattacaagaaatcttaacgtacaaatctgatgacgtagtt
ggtcgtgtgaaaacatacgaagcaatcgttaagggtgaaccaattccaaaaccaggcgtg
ccagaatcattccgcgtattggtgaaagaattacaatcacttggattagatatgcgcgta
ttggacattgaagaacaagaaatcgaattgcgtgatatggacgatgatgatgatgacttg
atcaccgttgatgccctaacaaaattcgcagaacaacaatcagcgaaacaattagaaaaa
gaagcagcggaagcaaaagaagcagctgatgcagtgcttgaacaagaaatagaaactgct
gaagatacaaaagactaa
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