Erwinia tasmaniensis: ETA_02230
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Entry
ETA_02230 CDS
T00711
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eta
Erwinia tasmaniensis
Pathway
eta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETA_02230 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eta03019
]
ETA_02230 (recQ)
03400 DNA repair and recombination proteins [BR:
eta03400
]
ETA_02230 (recQ)
Enzymes [BR:
eta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETA_02230 (recQ)
Messenger RNA biogenesis [BR:
eta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETA_02230 (recQ)
DNA repair and recombination proteins [BR:
eta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETA_02230 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAO95269
UniProt:
B2VI57
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All DBs
Position
267246..269078
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AA seq
610 aa
AA seq
DB search
MSTAAVINNEALADQVLRDTFGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIP
ALVRQGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQNREEQQNVMAGCRSGKVRLLY
IAPERLMMDNFLEQLTHCNPAMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPDVPVMAL
TATADDTTRNDIARLLQLDDPLIQVSSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNVHRARVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLEEKVQGPL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQACDNCDICLDPPRRYDGLVEAQKAL
SCIYRVGQRFGMGYIVEILRGANNQRIRDMQHDKLPVYGIGRDQSHEHWTSVLRQLIHLG
LVTQNIAMHSALQLTEAARPVLRGEVSLQLAVPRLVSVKPRGGGQKSFGGNYDRKLFAKL
RKLRKAIADDDNLPPYVVFNDATLIEMAEQMPITASEMLSVNGVGHKKLERFGKPFLLMI
KEHVDGGDDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagcagtcatcaataacgaagcgctggcggaccaggtattgcgtgatacc
ttcggctatcagcagtttcgcccgggacaacaaaccatcatccaggaatcgctgaacggg
cgtgactgcctggtggtgatgccaaccggtgggggtaaatcgctctgctatcaaattccg
gcgctggtgcgtcaggggctgacgctggtggtgtccccgctgatctcgctaatgaaagat
caggtcgatcagctgttggccaatggggtcgccgcagcctgcctcaactcgacgcaaaat
cgtgaagagcagcagaatgtgatggcaggctgtcgcagcggaaaagtgcggttgctctac
atcgcccctgaacgcctgatgatggacaacttccttgagcagctgacgcactgtaacccg
gcgatgcttgccgtggatgaagcgcactgtatctcgcagtgggggcacgacttccgcccg
gaatatggtgctctgggccagctgcgtcagcggctgcccgatgtgccggtcatggcattg
acggccacggccgatgacaccacccgtaacgatattgctcgcctgcttcagctcgacgac
ccgctgatccaggtcagcagcttcgatcggcctaatattcgctatacgctggtggaaaaa
tttaagccaaccgaacagctgctgcgctacgttcaggatcagcgcggcaaatgcggcatt
atttactgtaatagccgggcgaaagtcgaagatactgccgcccggctgcaaagccgtggt
ttgagcgttggggcttaccatgccggaatggataacgtacaccgcgcccgggtgcaggaa
gcatttcagcgcgatgacctgcaaatcgtggtggcaacggtagcgttcggaatgggcatc
aataagcccaacgtgcgctttgtggttcactttgatatcccgcgtaacattgagtcctac
tatcaggaaaccgggcgcgccgggcgtgatggcctgcccgcggaggcgctgctgctgtac
gatccggcggatatggcctggctgcgccgctgtctggaagagaaggttcaggggccgctg
ctggacattgaacgccataagctgaacgcgatgggcgcctttgccgaggcgcagacctgc
cgccgcctggtgctgttgaactatttcggcgaagggcgtcagcaggcgtgcgataactgt
gatatctgcctcgacccgccccggcggtacgatgggctggtcgaagcacaaaaagcgctt
tcctgcatctatcgcgttggccagcgctttggcatgggatatatcgttgagatcctacgc
ggtgccaataaccagcgtattcgcgatatgcagcacgataagctgccggtatatggcatt
ggccgcgatcaaagccatgaacactggaccagcgtgctgcgccagctgatccacctcggt
ttggtgacgcagaatatcgctatgcactctgccctgcaattgactgaagcggctcgtccg
gtgctgcgcggtgaggtttccctgcagctggccgtgccacgtctggtcagcgtaaaacca
cgcggcggcggccagaaatctttcggcggcaattatgaccgcaagctgtttgcgaagttg
cgtaaactgcgcaaggcgattgctgatgacgataatctaccgccgtacgtggtgtttaac
gacgcaacgctgattgaaatggcggagcagatgccgatcacggcgtcagagatgttgagt
gttaacggcgtggggcacaaaaagctggaacgctttggcaaaccgttcctgttgatgatt
aaagaacatgttgatggcggtgacgacgagtaa
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